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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
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NM_001115016.3 → NP_001108488.1 KAT8 regulatory NSL complex subunit 3 isoform 1
See identical proteins and their annotated locations for NP_001108488.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
BC063792, DB275425
- Consensus CDS
-
CCDS46361.1
- UniProtKB/TrEMBL
-
A0A590UJ53
- Related
- ENSP00000396749.1, ENST00000431828.6
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NM_001349256.2 → NP_001336185.1 KAT8 regulatory NSL complex subunit 3 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (8) differs in the 3' coding region and 3' UTR compared to variant 1. The encoded isoform (2) is longer than isoform 1.
- Source sequence(s)
-
AC079754, KF456684
- UniProtKB/TrEMBL
-
A0A590UJ53
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NM_001349257.2 → NP_001336186.1 KAT8 regulatory NSL complex subunit 3 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (9) contains an alternate exon in the 3' coding region, compared to variant 1. The encoded isoform (3) is longer than isoform 1.
- Source sequence(s)
-
AC079754
- Consensus CDS
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CCDS92814.1
- UniProtKB/Swiss-Prot
- A1L184, D3DXH3, D3DXH4, Q05BU4, Q6P3X2, Q6PJH6, Q86T19, Q96L64, Q9H0C9, Q9H8C9, Q9HAP8, Q9NWE5, Q9P2N6
- UniProtKB/TrEMBL
-
A0A590UJ53
- Related
- ENSP00000499674.1, ENST00000666923.1
-
NM_001349258.2 → NP_001336187.1 KAT8 regulatory NSL complex subunit 3 isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (10) contains an alternate exon in the 3' coding region, compared to variant 1. The encoded isoform (4) is longer than isoform 1.
- Source sequence(s)
-
AC079754
- UniProtKB/TrEMBL
-
A0A590UJ53
-
NM_001349259.2 → NP_001336188.1 KAT8 regulatory NSL complex subunit 3 isoform 5
Status: VALIDATED
- Description
- Transcript Variant: This variant (11) differs in the 5' UTR, contains an alternate exon in the 3' coding region, and initiates translation from a downstream start codon, compared to variant 1. The encoded isoform (5) is shorter than isoform 1.
- Source sequence(s)
-
AC079754
- UniProtKB/TrEMBL
-
B2RAV0
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NM_001349260.2 → NP_001336189.1 KAT8 regulatory NSL complex subunit 3 isoform 6
Status: VALIDATED
- Description
- Transcript Variant: This variant (12) differs in the 5' UTR, contains an alternate exon in the 3' coding region, and initiates translation from a downstream start codon, compared to variant 1. The encoded isoform (6) is shorter than isoform 1.
- Source sequence(s)
-
AC079754
- UniProtKB/TrEMBL
-
B4DYX5
- Conserved Domains (1) summary
-
- cl28330
Location:66 → 119
- XerC; Integrase [Replication, recombination and repair, Mobilome: prophages, transposons]
-
NM_001349261.2 → NP_001336190.1 KAT8 regulatory NSL complex subunit 3 isoform 7
Status: VALIDATED
- Description
- Transcript Variant: This variant (13) differs in the 5' UTR, contains an alternate exon in the 3' coding region, and initiates translation from a downstream start codon, compared to variant 1. The encoded isoform (7) is shorter than isoform 1. Both variants 13 and 14 encode the same isoform (7).
- Source sequence(s)
-
AC079754
- UniProtKB/TrEMBL
-
B4DYX5
- Conserved Domains (1) summary
-
- cl28330
Location:44 → 97
- XerC; Integrase [Replication, recombination and repair, Mobilome: prophages, transposons]
-
NM_001349262.2 → NP_001336191.1 KAT8 regulatory NSL complex subunit 3 isoform 7
Status: VALIDATED
- Description
- Transcript Variant: This variant (14) differs in the 5' UTR, contains an alternate exon in the 3' coding region, and initiates translation from a downstream start codon, compared to variant 1. The encoded isoform (7) is shorter than isoform 1. Both variants 13 and 14 encode the same isoform (7).
- Source sequence(s)
-
AC079754
- UniProtKB/TrEMBL
-
B4DYX5
- Conserved Domains (1) summary
-
- cl28330
Location:44 → 97
- XerC; Integrase [Replication, recombination and repair, Mobilome: prophages, transposons]
RNA
-
NR_047653.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 5' region, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AA526958, AY050169
- Related
-
ENST00000354204.10
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NR_047654.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses two alternate splice sites, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AA526958, AB037731, AK023813, DB133508
- Related
-
ENST00000447759.5
-
NR_047655.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks an alternate exon in the 5' region and contains an alternate exon in the 3' region, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
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AA526958, AB037731, AK302646, BQ063147, DB275425
-
NR_047656.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) lacks an alternate exon in the 5' region, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AA526958, AB037731, AK304011, DB275425
-
NR_047657.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) lacks an alternate exon and contains an alternate exon in the 3' region, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AA526958, AB037731, CB123459
- Related
-
ENST00000420155.5
-
NR_047658.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) lacks three alternate exons and contains two alternate exons, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
BC024276
- Related
-
ENST00000487070.5
-
NR_146098.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (15) lacks an alternate exon in the 3' region, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC079754
-
NR_146099.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (16) lacks an alternate exon, contains an alternate exon, and uses an alternate splice site, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC079754
-
NR_146100.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (17) lacks two alternate exons and contains an alternate exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC079754
-
NR_146101.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (18) lacks two alternate exons and contains two alternate exons, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the ztranscript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC079754
-
NR_146102.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (19) lacks two alternate exons, contains two alternate exons, and uses an alternate splice site, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC079754
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_017991.4: Suppressed sequence
- Description
- NM_017991.4: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.