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    LINC01352 long intergenic non-protein coding RNA 1352 [ Homo sapiens (human) ]

    Gene ID: 101929730, updated on 10-Dec-2024

    Summary

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    Official Symbol
    LINC01352provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 1352provided by HGNC
    Primary source
    HGNC:HGNC:50578
    See related
    Ensembl:ENSG00000238078 AllianceGenome:HGNC:50578
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LINC01352 in Genome Data Viewer
    Location:
    1q41
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (220829255..220832429)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (220068972..220072146)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (221002597..221005771)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene mitochondrial amidoxime reducing component 1 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:220986059-220987258 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:220991871-220992562 Neighboring gene uncharacterized LOC124900455 Neighboring gene RNA, U6atac small nuclear 35, pseudogene Neighboring gene HLX antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1827 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:221053510-221054118 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:221064967-221065512 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:221065513-221066058 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:221067145-221067784 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:221069442-221070370 Neighboring gene H2.0 like homeobox Neighboring gene uncharacterized LOC105372930

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110797.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL445423, BC034007
      Related
      ENST00000431347.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      220829255..220832429
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      220068972..220072146
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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