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    DNAJ heat shock N-terminal domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832782, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DNAJ heat shock N-terminal domain-containing protein
    Primary source
    TAIR:AT5G27240
    Locus tag
    AT5G27240
    See related
    Araport:AT5G27240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T21B4.150; T21B4_150
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (9596766..9601233)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Frigida-like protein Neighboring gene Plant self-incompatibility protein S1 family Neighboring gene uncharacterized protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001343997.1
    NM_001343998.1
    NM_122606.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DNAJ heat shock N-terminal domain-containing protein
    NP_001318662.1
    • DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT3G04980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      9596766..9601233
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001343997.1 → NP_001318662.1  DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U8A4, A0A7G2FHJ3, F4K2V2
      Conserved Domains (3) summary
      CHL00189
      Location:238 → 356
      infB; translation initiation factor 2; Provisional
      pfam00226
      Location:66 → 127
      DnaJ; DnaJ domain
      pfam11926
      Location:474 → 668
      DUF3444; Domain of unknown function (DUF3444)

    2. NM_001343998.1 → NP_001332746.1  DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U8A4, A0A7G2FHJ3, F4K2V2
      Conserved Domains (3) summary
      CHL00189
      Location:238 → 356
      infB; translation initiation factor 2; Provisional
      pfam00226
      Location:66 → 127
      DnaJ; DnaJ domain
      pfam11926
      Location:474 → 668
      DUF3444; Domain of unknown function (DUF3444)

    3. NM_122606.1 → NP_198076.1  DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198076.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U8A4, A0A7G2FHJ3, F4K2V2
      Conserved Domains (3) summary
      CHL00189
      Location:238 → 356
      infB; translation initiation factor 2; Provisional
      pfam00226
      Location:66 → 127
      DnaJ; DnaJ domain
      pfam11926
      Location:474 → 668
      DUF3444; Domain of unknown function (DUF3444)
    Nucleotide Protein
    Heading Accession and Version

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