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    Calcium-dependent phosphotriesterase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843739, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Calcium-dependent phosphotriesterase superfamily protein
    Primary source
    TAIR:AT1G74010
    Locus tag
    AT1G74010
    See related
    Araport:AT1G74010
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2P9.12; F2P9_12
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (27832095..27834207, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene signal peptide peptidase Neighboring gene strictosidine synthase 3 Neighboring gene strictosidine synthase 2 Neighboring gene uncharacterized protein Neighboring gene enolase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis cell wall proteome defined using multidimensional protein identification technology. Bayer EM, et al. Proteomics, 2006 Jan. PMID 16287169
    2. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_106060.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables strictosidine synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion HDA PubMed 
    located_in plant-type cell wall HDA PubMed 
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    Calcium-dependent phosphotriesterase superfamily protein
    NP_177541.1
    • Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: biosynthetic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: strictosidine synthase 2 (TAIR:AT1G74020.1); Has 953 Blast hits to 943 proteins in 185 species: Archae - 1; Bacteria - 180; Metazoa - 219; Fungi - 0; Plants - 462; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27832095..27834207 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106060.3 → NP_177541.1  Calcium-dependent phosphotriesterase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177541.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WFN8, Q9C9C2
      Conserved Domains (2) summary
      COG3386
      Location:38 → 289
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]
      pfam03088
      Location:144 → 232
      Str_synth; Strictosidine synthase
    Nucleotide Protein
    Heading Accession and Version

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