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    LpxK tetraacyldisaccharide 4'-kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821594, updated on 18-Sep-2024

    Summary

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    Official Symbol
    LpxK
    Official Full Name
    tetraacyldisaccharide 4'-kinase family protein
    Primary source
    TAIR:AT3G20480
    Locus tag
    AT3G20480
    See related
    Araport:AT3G20480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtLpxK; lipid X K
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    Genomic context

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    See LpxK in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (7151387..7153464, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene glycine-rich protein 5 Neighboring gene MUTS-homologue 5 Neighboring gene Rho GTPase-activating protein Neighboring gene purple acid phosphatase 18

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pathway for lipid A biosynthesis in Arabidopsis thaliana resembling that of Escherichia coli. Li C, et al. Proc Natl Acad Sci U S A, 2011 Jul 12. PMID 21709257, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001203012.1
    NM_001338482.1
    NM_001338483.1
    NM_001338484.1
    NM_112940.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables tetraacyldisaccharide 4'-kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables tetraacyldisaccharide 4'-kinase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid X metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tetraacyldisaccharide 4'-kinase family protein
    NP_001189941.1
    • tetraacyldisaccharide 4'-kinase family protein; FUNCTIONS IN: tetraacyldisaccharide 4'-kinase activity, ATP binding; INVOLVED IN: lipid A biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: sepal, root, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Tetraacyldisaccharide 4'-kinase (InterPro:IPR003758).
    NP_566663.1
    • tetraacyldisaccharide 4'-kinase family protein; FUNCTIONS IN: tetraacyldisaccharide 4'-kinase activity, ATP binding; INVOLVED IN: lipid A biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: sepal, root, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Tetraacyldisaccharide 4'-kinase (InterPro:IPR003758); Has 4415 Blast hits to 4415 proteins in 1307 species: Archae - 0; Bacteria - 2721; Metazoa - 2; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 1668 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7151387..7153464 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203012.1 → NP_001189941.1  tetraacyldisaccharide 4'-kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189941.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XE15, F4JEP7
      Conserved Domains (1) summary
      cl23778
      Location:27 → 327
      LpxK; Tetraacyldisaccharide-1-P 4'-kinase

    2. NM_001338482.1 → NP_001327105.1  tetraacyldisaccharide 4'-kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LRA2
      Conserved Domains (1) summary
      cl23778
      Location:1 → 243
      LpxK; Tetraacyldisaccharide-1-P 4'-kinase

    3. NM_112940.3 → NP_566663.1  tetraacyldisaccharide 4'-kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566663.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LEA0, Q9LJV0
      UniProtKB/TrEMBL
      A0A178VBJ6, A0A5S9XE15
      Conserved Domains (1) summary
      pfam02606
      Location:27 → 378
      LpxK; Tetraacyldisaccharide-1-P 4'-kinase

    4. NM_001338483.1 → NP_001327103.1  tetraacyldisaccharide 4'-kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LRA0, A0A7G2ENC0
      Conserved Domains (1) summary
      cl23778
      Location:1 → 300
      LpxK; Tetraacyldisaccharide-1-P 4'-kinase

    5. NM_001338484.1 → NP_001327104.1  tetraacyldisaccharide 4'-kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LRA1, A0A7G2ENC0
      Conserved Domains (1) summary
      cl23778
      Location:1 → 270
      LpxK; Tetraacyldisaccharide-1-P 4'-kinase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LEA0.1

    Gene LinkOut

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