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    LPP4 Phosphatidic acid phosphatase (PAP2) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821350, updated on 18-Sep-2024

    Summary

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    Official Symbol
    LPP4
    Official Full Name
    Phosphatidic acid phosphatase (PAP2) family protein
    Primary source
    TAIR:AT3G18220
    Locus tag
    AT3G18220
    See related
    Araport:AT3G18220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    lipid phosphate phosphatase 4
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    Genomic context

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    See LPP4 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (6247900..6250007)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Octicosapeptide/Phox/Bem1p family protein Neighboring gene uncharacterized protein Neighboring gene Ribosomal protein S24/S35

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_112706.3

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in phospholipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Phosphatidic acid phosphatase (PAP2) family protein
    NP_566602.1
    • Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity, phosphatidate phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 2 (TAIR:AT1G15080.1); Has 2090 Blast hits to 2085 proteins in 382 species: Archae - 5; Bacteria - 336; Metazoa - 902; Fungi - 401; Plants - 197; Viruses - 3; Other Eukaryotes - 246 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6247900..6250007
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112706.3 → NP_566602.1  Phosphatidic acid phosphatase (PAP2) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566602.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WNG6, Q8LAS9, Q9LJQ8
      UniProtKB/TrEMBL
      A0A5S9XDE8, A0A654F8C9
      Conserved Domains (2) summary
      COG0671
      Location:23 → 246
      PgpB; Membrane-associated phospholipid phosphatase [Lipid transport and metabolism]
      cd03390
      Location:55 → 244
      PAP2_containing_1_like; PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1. Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0WNG6.1

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