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    GAE3 UDP-D-glucuronate 4-epimerase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828145, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GAE3
    Official Full Name
    UDP-D-glucuronate 4-epimerase 3
    Primary source
    TAIR:AT4G00110
    Locus tag
    AT4G00110
    See related
    Araport:AT4G00110
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F6N15.16; F6N15_16; UDP-D-glucuronate 4-epimerase 3
    Summary
    Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.
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    Genomic context

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    See GAE3 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (38480..40298, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tRNA-Lys Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene ribosomal protein S13A Neighboring gene miscRNA Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The biosynthesis of D-Galacturonate in plants. functional cloning and characterization of a membrane-anchored UDP-D-Glucuronate 4-epimerase from Arabidopsis. Mølhøj M, et al. Plant Physiol, 2004 Jul. PMID 15247385, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_116228.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables UDP-glucuronate 4-epimerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables UDP-glucuronate 4-epimerase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    UDP-D-glucuronate 4-epimerase 3
    NP_191922.1
    • UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      38480..40298 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116228.3 → NP_191922.1  UDP-D-glucuronate 4-epimerase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191922.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81312
      UniProtKB/TrEMBL
      A0A178V2K1, A0A5S9XNS2
      Conserved Domains (1) summary
      cl21454
      Location:93 → 421
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O81312.1

    Gene LinkOut

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