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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827581, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT4G18490
    Locus tag
    AT4G18490
    See related
    Araport:AT4G18490
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28J12.150; F28J12_150
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    16
    Sequence:
    Chromosome: 4; NC_003075.7 (10203598..10208769)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene negative regulator of systemic acquired resistance (SNI1) Neighboring gene D-Tyr-tRNA(Tyr) deacylase family protein Neighboring gene RNA helicase family protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of ubiquitinated proteins in Arabidopsis. Manzano C, et al. Plant Mol Biol, 2008 Sep. PMID 18535787
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001125535.2
    NM_117963.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001119007.2
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, shoot apex, embryo, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_193584.3
    • unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10203598..10208769
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001341284.1 → NP_001328810.1  uncharacterized protein AT4G18490 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZ69, A0A1P8B5R8

    2. NM_001341285.1 → NP_001328809.1  uncharacterized protein AT4G18490 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZ69, A0A1P8B5S4

    3. NM_001341286.1 → NP_001328808.1  uncharacterized protein AT4G18490 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZ69, A0A1P8B5T3

    4. NM_001341287.1 → NP_001328807.1  uncharacterized protein AT4G18490 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B5S5, A0A654FQJ0

    5. NM_001341288.1 → NP_001328806.1  uncharacterized protein AT4G18490 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B5S5, A0A654FQJ0

    6. NM_117963.3 → NP_193584.3  uncharacterized protein AT4G18490 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193584.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JRJ8, P16128, Q9SB82
      UniProtKB/TrEMBL
      A0A654FQJ0

    7. NM_001125535.2 → NP_001119007.2  uncharacterized protein AT4G18490 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119007.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FQJ0, F4JRJ9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P16128.3

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