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    WRKY34 WRKY DNA-binding protein 34 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828750, updated on 18-Sep-2024

    Summary

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    Official Symbol
    WRKY34
    Official Full Name
    WRKY DNA-binding protein 34
    Primary source
    TAIR:AT4G26440
    Locus tag
    AT4G26440
    See related
    Araport:AT4G26440
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATWRKY34; M3E9.130; M3E9_130; MICROSPORE-SPECIFIC PROMOTER 3; MICROSPORE-SPECIFIC PROMOTER 3; MSP3; WRKY DNA-binding protein 34
    Summary
    member of WRKY Transcription Factor; Group I
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    Genomic context

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    See WRKY34 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (13357596..13359551, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene ncRNA Neighboring gene COP9 signalosome subunit 6B Neighboring gene uncharacterized protein Neighboring gene WPP domain interacting protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Male gametophyte-specific WRKY34 transcription factor mediates cold sensitivity of mature pollen in Arabidopsis. Zou C, et al. J Exp Bot, 2010 Sep. PMID 20643804, Free PMC Article
    2. Arabidopsis WRKY2 and WRKY34 transcription factors interact with VQ20 protein to modulate pollen development and function. Lei R, et al. Plant J, 2017 Sep. PMID 28635025
    3. Phosphorylation of a WRKY transcription factor by MAPKs is required for pollen development and function in Arabidopsis. Guan Y, et al. PLoS Genet, 2014. PMID 24830428, Free PMC Article
    4. The WRKY superfamily of plant transcription factors. Eulgem T, et al. Trends Plant Sci, 2000 May. PMID 10785665
    5. An Arabidopsis gene regulatory network for secondary cell wall synthesis. Taylor-Teeples M, et al. Nature, 2015 Jan 29. PMID 25533953, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The study provides evidence that VQ20 acts as a key partner of WRKY2 and WKRY34 in plant male gametogenesis.
      Title: Arabidopsis WRKY2 and WRKY34 transcription factors interact with VQ20 protein to modulate pollen development and function.
    2. Loss of MPK3/MPK6 phosphorylation sites in WRKY34 compromises the function of WRKY34 in vivo
      Title: Phosphorylation of a WRKY transcription factor by MAPKs is required for pollen development and function in Arabidopsis.
    3. the WRKY34 transcription factor negatively mediated cold sensitivity of mature Arabidopsis pollen and might be involved in the CBF signal cascade in mature pollen.
      Title: Male gametophyte-specific WRKY34 transcription factor mediates cold sensitivity of mature pollen in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    NM_118777.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within pollen development IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen germination IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to cold IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    WRKY DNA-binding protein 34
    NP_194374.1
    • WRKY DNA-binding protein 34 (WRKY34); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 2 (TAIR:AT5G56270.1); Has 5766 Blast hits to 3064 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5735; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13357596..13359551 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118777.2 → NP_194374.1  WRKY DNA-binding protein 34 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194374.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65590
      UniProtKB/TrEMBL
      A0A5S9XWY2, A0A654FTF1, A4FVR3
      Conserved Domains (2) summary
      smart00774
      Location:371 → 428
      WRKY; DNA binding domain
      pfam03106
      Location:179 → 233
      WRKY; WRKY DNA -binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O65590.1

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