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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824024, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT3G48640
    Locus tag
    AT3G48640
    See related
    Araport:AT3G48640
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (18021356..18022648, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Outer membrane OMP85 family protein Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene miscRNA Neighboring gene transmembrane protein, putative (DUF 3339)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001339375.1
    NM_114723.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001319710.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT5G66670.2); Has 42 Blast hits to 42 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      18021356..18022648 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339376.1 → NP_001325918.1  uncharacterized protein AT3G48640 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FEW9, Q9SMN5

    2. NM_001339375.1 → NP_001319710.1  uncharacterized protein AT3G48640 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FEW9, Q9SMN5

    3. NM_114723.1 → NP_190433.1  uncharacterized protein AT3G48640 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190433.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FEW9, Q9SMN5
      Conserved Domains (1) summary
      cl21731
      Location:3 → 171
      DUF677; Protein of unknown function (DUF677)
    Nucleotide Protein
    Heading Accession and Version

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