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    cyclin-dependent kinase inhibitor SMR3-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834044, updated on 18-Sep-2024

    Summary

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    Official Full Name
    cyclin-dependent kinase inhibitor SMR3-like protein
    Primary source
    TAIR:AT5G40460
    Locus tag
    AT5G40460
    See related
    Araport:AT5G40460
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K21I16.3; K21I16_3
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (16202142..16203358)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase 3 Neighboring gene A-kinase anchor-like protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene RNI-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An improved toolbox to unravel the plant cellular machinery by tandem affinity purification of Arabidopsis protein complexes. Van Leene J, et al. Nat Protoc, 2015 Jan. PMID 25521792
    2. A tandem affinity purification-based technology platform to study the cell cycle interactome in Arabidopsis thaliana. Van Leene J, et al. Mol Cell Proteomics, 2007 Jul. PMID 17426018
    3. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Van Leene J, et al. Mol Syst Biol, 2010 Aug 10. PMID 20706207, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_123410.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA endoreduplication IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    cyclin-dependent kinase inhibitor SMR3-like protein
    NP_198862.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      16202142..16203358
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123410.2 → NP_198862.1  cyclin-dependent kinase inhibitor SMR3-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198862.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q29Q81, Q8LCF0, Q9FI64
      UniProtKB/TrEMBL
      A0A178UJ09, A0A5S9Y9L0, A0A654G6L5
      Conserved Domains (1) summary
      PLN03031
      Location:1 → 112
      PLN03031; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q29Q81.1

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