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    hypothetical protein (DUF688) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834625, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF688)
    Primary source
    TAIR:AT5G45850
    Locus tag
    AT5G45850
    See related
    Araport:AT5G45850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K15I22.5; K15I22_5
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (18599746..18601661, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene delay of germination 1 Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene PYR1-like 11 Neighboring gene PYR1-like 12

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_123953.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF688)
    NP_199397.2
    • Protein of unknown function (DUF688); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT4G18630.1); Has 103 Blast hits to 72 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 1; Plants - 89; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      18599746..18601661 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123953.4 → NP_199397.2  hypothetical protein (DUF688) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199397.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YBC9, A0A654G8X5, F4KEN8
      Conserved Domains (1) summary
      pfam05097
      Location:1 → 357
      DUF688; Protein of unknown function (DUF688)
    Nucleotide Protein
    Heading Accession and Version

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