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    F-box/RNI-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836182, updated on 18-Sep-2024

    Summary

    Official Full Name
    F-box/RNI-like superfamily protein
    Primary source
    TAIR:AT5G60610
    Locus tag
    AT5G60610
    See related
    Araport:AT5G60610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MUP24.3; MUP24_3
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    Genomic context

    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (24363591..24365615)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene DHBP synthase RibB-like alpha/beta domain-containing protein Neighboring gene 4-hydroxy-3-methylbut-2-enyl diphosphate synthase Neighboring gene Defensin-like (DEFL) family protein Neighboring gene glycerol-3-phosphate acyltransferase 9 Neighboring gene uncharacterized protein Neighboring gene ncRNA

    General gene information

    NM_001345429.1
    NM_125454.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus  

    General protein information

    Preferred Names
    F-box/RNI-like superfamily protein
    NP_200869.1
    • F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT2G26860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24363591..24365615
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125454.3 → NP_200869.1  F-box/RNI-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200869.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FF58
      UniProtKB/TrEMBL
      A0A178URD5, A0A5S9YI52
      Conserved Domains (4) summary
      sd00032
      Location:125 → 147
      LRR_2; leucine-rich repeat [structural motif]
      pfam07723
      Location:147 → 172
      LRR_2; Leucine Rich Repeat
      pfam00646
      Location:2 → 45
      F-box; F-box domain
      pfam08387
      Location:342 → 386
      FBD
    2. NM_001345429.1 → NP_001330715.1  F-box/RNI-like superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FF58
      UniProtKB/TrEMBL
      A0A178URD5, A0A5S9YI52
      Conserved Domains (4) summary
      sd00032
      Location:125 → 147
      LRR_2; leucine-rich repeat [structural motif]
      pfam07723
      Location:147 → 172
      LRR_2; Leucine Rich Repeat
      pfam00646
      Location:2 → 45
      F-box; F-box domain
      pfam08387
      Location:342 → 386
      FBD
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