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    GTP binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836726, updated on 18-Sep-2024

    Summary

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    Official Full Name
    GTP binding protein
    Primary source
    TAIR:AT5G65960
    Locus tag
    AT5G65960
    See related
    Araport:AT5G65960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K2A18.2; K2A18_2
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (26385348..26387447)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene beta-hydroxyisobutyryl-CoA hydrolase 1 Neighboring gene miscRNA Neighboring gene trafficking protein particle complex subunit-like protein Neighboring gene ncRNA Neighboring gene Seven transmembrane MLO family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Auxin efflux carrier family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The clathrin adaptor complex AP-2 mediates endocytosis of brassinosteroid insensitive1 in Arabidopsis. Di Rubbo S, et al. Plant Cell, 2013 Aug. PMID 23975899, Free PMC Article
    2. Identification and dynamics of Arabidopsis adaptor protein-2 complex and its involvement in floral organ development. Yamaoka S, et al. Plant Cell, 2013 Aug. PMID 23975897, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_125993.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    GTP binding protein
    NP_569023.1
    • GTP binding; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial Rho-like (InterPro:IPR013684), Alpha/gamma-adaptin-binding protein p34 (InterPro:IPR019341); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      26385348..26387447
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125993.3 → NP_569023.1  GTP binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_569023.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178ULT6, A0A654GEI1, Q8VZ15
      Conserved Domains (2) summary
      pfam10199
      Location:328 → 377
      Adaptin_binding; Alpha and gamma adaptin binding protein p34
      cl38936
      Location:7 → 128
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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