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    SP1L4 SPIRAL1-like4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831412, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SP1L4
    Official Full Name
    SPIRAL1-like4
    Primary source
    TAIR:AT5G15600
    Locus tag
    AT5G15600
    See related
    Araport:AT5G15600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    SPIRAL1-like4; T20K14.210; T20K14_210
    Summary
    SPIRAL1-LIKE4 belongs to a six-member gene family in Arabidopsis; all members share high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root, leaf and petal growth as a result of defective anisotropic cell expansion.
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    Genomic context

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    See SP1L4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (5078200..5079327)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Bromodomain transcription factor Neighboring gene longifolia1 Neighboring gene uncharacterized protein Neighboring gene Proteasome component (PCI) domain protein Neighboring gene F-box/RNI-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SPIRAL1 encodes a plant-specific microtubule-localized protein required for directional control of rapidly expanding Arabidopsis cells. Nakajima K, et al. Plant Cell, 2004 May. PMID 15084720, Free PMC Article
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001343410.1
    NM_121564.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in cortical microtubule organization IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    SPIRAL1-like4
    NP_197064.1
    • SPIRAL1-like4 (SP1L4); BEST Arabidopsis thaliana protein match is: SPIRAL1-like3 (TAIR:AT3G02180.2); Has 230 Blast hits to 203 proteins in 47 species: Archae - 0; Bacteria - 6; Metazoa - 11; Fungi - 4; Plants - 139; Viruses - 2; Other Eukaryotes - 68 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5078200..5079327
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121564.3 → NP_197064.1  SPIRAL1-like4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197064.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LBJ3, Q9LF22
      UniProtKB/TrEMBL
      A0A178U7W0, A0A5S9Y4E1

    2. NM_001343410.1 → NP_001330276.1  SPIRAL1-like4 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LBJ3, Q9LF22
      UniProtKB/TrEMBL
      A0A178U7W0, A0A5S9Y4E1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LF22.1

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