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    EEIG1/EHBP1 protein amino-terminal domain protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832183, updated on 18-Sep-2024

    Summary

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    Official Full Name
    EEIG1/EHBP1 protein amino-terminal domain protein
    Primary source
    TAIR:AT5G20610
    Locus tag
    AT5G20610
    See related
    Araport:AT5G20610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T1M15.10; T1M15_10
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (6968611..6972995)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene TMEM192 family protein Neighboring gene TRICHOME BIREFRINGENCE-LIKE 5 Neighboring gene ribosomal RNA processing-like protein Neighboring gene ubiquitin 4 Neighboring gene germin 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PLASTID MOVEMENT IMPAIRED1 and PLASTID MOVEMENT IMPAIRED1-RELATED1 Mediate Photorelocation Movements of Both Chloroplasts and Nuclei. Suetsugu N, et al. Plant Physiol, 2015 Oct. PMID 26324877, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. PMIR1 is indispensable for photorelocation movements of plastids and thus, nuclei in pavement cells.
      Title: PLASTID MOVEMENT IMPAIRED1 and PLASTID MOVEMENT IMPAIRED1-RELATED1 Mediate Photorelocation Movements of Both Chloroplasts and Nuclei.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_122068.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in actin filament-based movement IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in chloroplast avoidance movement IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within chloroplast relocation IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in chloroplast relocation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within nuclear migration along microfilament IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in nuclear migration along microfilament IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to blue light IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular anatomical structure IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    EEIG1/EHBP1 protein amino-terminal domain protein
    NP_197561.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      6968611..6972995
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122068.3 → NP_197561.1  EEIG1/EHBP1 protein amino-terminal domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197561.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4K5K6, Q0WLI8, Q84W59
      UniProtKB/TrEMBL
      A0A178UKD6, A0A5S9Y877, A0A654G2W3
      Conserved Domains (1) summary
      pfam10358
      Location:73 → 223
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4K5K6.1

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