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    heavy-metal-associated domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842153, updated on 18-Sep-2024

    Summary

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    Official Full Name
    heavy-metal-associated domain-containing protein
    Primary source
    TAIR:AT1G57780
    Locus tag
    AT1G57780
    See related
    Araport:AT1G57780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12K22.17; F12K22_17
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (21403000..21404338)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ECA1 gametogenesis family protein (DUF784) Neighboring gene ECA1 gametogenesis family protein (DUF784) Neighboring gene F-box family protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    heavy-metal-associated domain-containing protein
    NP_176089.1
    • heavy-metal-associated domain-containing protein; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT4G13380.1); Has 459 Blast hits to 412 proteins in 76 species: Archae - 5; Bacteria - 32; Metazoa - 42; Fungi - 8; Plants - 269; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      21403000..21404338
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104573.2 → NP_176089.1  heavy-metal-associated domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176089.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FVS0
      UniProtKB/TrEMBL
      A0A654EKW7
      Conserved Domains (1) summary
      pfam00403
      Location:138 → 194
      HMA; Heavy-metal-associated domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FVS0.1

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