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    IGFBP-AS1 IGFBP5 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 101928278, updated on 10-Dec-2024

    Summary

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    Official Symbol
    IGFBP-AS1provided by HGNC
    Official Full Name
    IGFBP5 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:55655
    See related
    Ensembl:ENSG00000223874 AllianceGenome:HGNC:55655
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See IGFBP-AS1 in Genome Data Viewer
    Location:
    2q35
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (216694446..216811073)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (217176876..217293516)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (217559169..217675796)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:217508368-217508942 Neighboring gene insulin like growth factor binding protein 2 Neighboring gene uncharacterized LOC124900515 Neighboring gene insulin like growth factor binding protein 5 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12306 Neighboring gene ribosomal protein L31 pseudogene 14 Neighboring gene RNA, 5S ribosomal pseudogene 120 Neighboring gene fatty acid binding protein 5 pseudogene 14 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:217706511-217707710 Neighboring gene uncharacterized LOC124907978 Neighboring gene uncharacterized LOC124907979

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Clone Names

    • AC007563.3, AC007563.5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_187138.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC007563

    2. NR_187139.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC007563
      Related
      ENST00000772330.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      216694446..216811073
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      217176876..217293516
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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