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    PRAMEF17 PRAME family member 17 [ Homo sapiens (human) ]

    Gene ID: 391004, updated on 27-Nov-2024

    Summary

    Official Symbol
    PRAMEF17provided by HGNC
    Official Full Name
    PRAME family member 17provided by HGNC
    Primary source
    HGNC:HGNC:29485
    See related
    Ensembl:ENSG00000204479 AllianceGenome:HGNC:29485
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    Predicted to be involved in several processes, including negative regulation of DNA-templated transcription; negative regulation of apoptotic process; and positive regulation of cell population proliferation. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
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    Genomic context

    See PRAMEF17 in Genome Data Viewer
    Location:
    1p36.21
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (13389632..13392629)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (12830908..12833905)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (13716092..13719089)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene PRAME family member 14 Neighboring gene PRAME family member 19 Neighboring gene PRAME family member 20 Neighboring gene uncharacterized LOC102724856 Neighboring gene leucine rich repeat containing 38

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001099851.3NP_001093321.1  PRAME family member 17

      See identical proteins and their annotated locations for NP_001093321.1

      Status: VALIDATED

      Source sequence(s)
      AC243961, BC146858
      Consensus CDS
      CCDS41264.1
      UniProtKB/Swiss-Prot
      B2RUU4, Q5VTA0
      Related
      ENSP00000365266.3, ENST00000376098.4

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      13389632..13392629
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      12830908..12833905
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)