Pcdhb22 protocadherin beta 22 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Pcdhb22provided by RGD
Official Full Name: protocadherin beta 22provided by RGD
Primary source: RGD:1310328
See related: EnsemblRapid:ENSRNOG00000020028 AllianceGenome:RGD:1310328
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: pcdh-T5
Summary: Predicted to enable calcium ion binding activity. Predicted to be involved in cell adhesion. Predicted to be located in photoreceptor connecting cilium. Predicted to be active in plasma membrane. Orthologous to human PCDHB15 (protocadherin beta 15). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

Location:: 18p11

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	18	NC_086036.1 (29497038..29503142)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	18	NC_051353.1 (29223028..29229132)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	18	NC_005117.4 (30590864..30595456)

Chromosome 18 - NC_086036.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables calcium ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in cell adhesion	IBA Inferred from Biological aspect of Ancestor more info
involved_in homophilic cell adhesion via plasma membrane adhesion molecules	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in photoreceptor connecting cilium	ISO Inferred from Sequence Orthology more info
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: protocadherin beta-15

Names: protocadherin-T5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.