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    Pimreg PICALM interacting mitotic regulator [ Rattus norvegicus (Norway rat) ]

    Gene ID: 360559, updated on 27-Nov-2024

    Summary

    Official Symbol
    Pimregprovided by RGD
    Official Full Name
    PICALM interacting mitotic regulatorprovided by RGD
    Primary source
    RGD:1308747
    See related
    AllianceGenome:RGD:1308747
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Fam64a; RGD1308747
    Summary
    Predicted to be located in nucleolus and nucleoplasm. Orthologous to human PIMREG (PICALM interacting mitotic regulator). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Adrenal (RPKM 25.6), Heart (RPKM 18.0) and 9 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Pimreg in Genome Data Viewer
    Location:
    10q24
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (57168136..57173713)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (56669603..56674540)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (58613588..58618524)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134478829 Neighboring gene aryl hydrocarbon receptor-interacting protein-like 1 Neighboring gene PITPNM family member 3 Neighboring gene RIKEN cDNA 4933427D14 gene like Neighboring gene uncharacterized LOC134480818 Neighboring gene thioredoxin domain containing 17

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    protein PIMREG
    Names
    family with sequence similarity 64, member A
    protein FAM64A

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001113781.2NP_001107253.2  protein PIMREG

      See identical proteins and their annotated locations for NP_001107253.2

      Status: PROVISIONAL

      Source sequence(s)
      BC158692
      UniProtKB/TrEMBL
      B0BN57, F7EXP2
      Conserved Domains (1) summary
      pfam07326
      Location:1223
      DUF1466; Protein of unknown function (DUF1466)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      57168136..57173713
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006246760.4XP_006246822.1  protein PIMREG isoform X1

      See identical proteins and their annotated locations for XP_006246822.1

      UniProtKB/TrEMBL
      B0BN57, F7EXP2
      Conserved Domains (1) summary
      pfam07326
      Location:1223
      DUF1466; Protein of unknown function (DUF1466)