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    Tmem205 transmembrane protein 205 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 300441, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Tmem205provided by RGD
    Official Full Name
    transmembrane protein 205provided by RGD
    Primary source
    RGD:1563250
    See related
    EnsemblRapid:ENSRNOG00000011747 AllianceGenome:RGD:1563250
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1563250
    Summary
    Predicted to be located in membrane. Orthologous to human TMEM205 (transmembrane protein 205). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Liver (RPKM 939.7), Kidney (RPKM 201.8) and 5 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Tmem205 in Genome Data Viewer
    Location:
    8q13
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (28728172..28733908, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (20452092..20458011, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (22932175..22937953, complement)

    Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120094090 Neighboring gene RAB3D, member RAS oncogene family Neighboring gene coiled-coil domain containing 159 Neighboring gene phospholipid phosphatase related 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Proteomic analysis of podocyte exosome-enriched fraction from normal human urine. Prunotto M, et al. J Proteomics, 2013 Apr 26. PMID 23376485

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane protein 205

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001106804.2 → NP_001100274.1  transmembrane protein 205

      See identical proteins and their annotated locations for NP_001100274.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000008
      UniProtKB/TrEMBL
      A6JNV5, A6JNV8, D3ZJZ0
      Related
      ENSRNOP00000015684.5, ENSRNOT00000015684.7
      Conserved Domains (1) summary
      pfam13664
      Location:17 → 114
      DUF4149; Domain of unknown function (DUF4149)

    2. NM_001433077.1 → NP_001420006.1  transmembrane protein 205

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000008
      UniProtKB/TrEMBL
      A6JNV5, A6JNV8, D3ZJZ0

    3. NM_001433078.1 → NP_001420007.1  transmembrane protein 205

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000008
      UniProtKB/TrEMBL
      A6JNV5, A6JNV8, D3ZJZ0

    4. NM_001433079.1 → NP_001420008.1  transmembrane protein 205

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000008
      UniProtKB/TrEMBL
      A6JNV5, A6JNV8, D3ZJZ0

    5. NM_001433080.1 → NP_001420009.1  transmembrane protein 205

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000008
      UniProtKB/TrEMBL
      A6JNV5, A6JNV8, D3ZJZ0

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086026.1 Reference GRCr8

      Range
      28728172..28733908 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006242621.5 → XP_006242683.1  transmembrane protein 205 isoform X1

      Conserved Domains (1) summary
      pfam13664
      Location:17 → 114
      DUF4149; Domain of unknown function (DUF4149)
    Nucleotide Protein Strain
    Heading Accession and Version

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