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    Speer9-ps1 spermatogenesis associated glutamate (E)-rich protein 9, pseudogene 1 [ Mus musculus (house mouse) ]

    Gene ID: 73949, updated on 22-Oct-2024

    Summary

    Official Symbol
    Speer9-ps1provided by MGI
    Official Full Name
    spermatogenesis associated glutamate (E)-rich protein 9, pseudogene 1provided by MGI
    Primary source
    MGI:MGI:1921199
    See related
    Ensembl:ENSMUSG00000107956 AllianceGenome:MGI:1921199
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    SPEER-9; Speer9-ps; 4930415A14Rik
    Expression
    Restricted expression toward testis adult (RPKM 2.1) See more
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    Genomic context

    See Speer9-ps1 in Genome Data Viewer
    Location:
    7 A1; 7 1.83 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (3178146..3194832)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (3128146..3144992)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH type containing 3 pseudogene Neighboring gene ER membrane protein complex subunit 4 pseudogene Neighboring gene zinc finger pseudogene Neighboring gene expressed sequence AU018091

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Other Names

    • sperm-associated glutamate (E)-rich protein 9, pseudogene
    • spermatogeenesis associated glutamate (E)-rich protein 9, pseudogene 1
    • spermatogenic-associated glutamate (E)-rich protein 9, pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_001583.3 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK015142, BY714690
      Related
      ENSMUST00000203447.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      3178146..3194832
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)