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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_012121.2 RefSeqGene
- Range
-
24191..117349
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_002894.3 → NP_002885.1 DNA endonuclease RBBP8 isoform a
See identical proteins and their annotated locations for NP_002885.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript. Variants 1 and 2 both encode isoform a.
- Source sequence(s)
-
AC091147, AF043431, BG723261
- Consensus CDS
-
CCDS11875.1
- UniProtKB/Swiss-Prot
- A6NKN2, A8K8W6, E7ETY1, O75371, Q8NHQ3, Q99708
- UniProtKB/TrEMBL
-
I6L8A6
- Related
- ENSP00000323050.5, ENST00000327155.10
- Conserved Domains (2) summary
-
- pfam08573
Location:797 → 857
- SAE2; DNA repair protein endonuclease SAE2/CtIP C-terminus
- pfam10482
Location:20 → 138
- CtIP_N; tumor-suppressor protein CtIP N-terminal domain
-
NM_203291.2 → NP_976036.1 DNA endonuclease RBBP8 isoform a
See identical proteins and their annotated locations for NP_976036.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode isoform a.
- Source sequence(s)
-
AC091147, AF043431, BC001170, BU187672, U72066
- Consensus CDS
-
CCDS11875.1
- UniProtKB/Swiss-Prot
- A6NKN2, A8K8W6, E7ETY1, O75371, Q8NHQ3, Q99708
- UniProtKB/TrEMBL
-
I6L8A6
- Related
- ENSP00000382628.2, ENST00000399722.6
- Conserved Domains (2) summary
-
- pfam08573
Location:797 → 857
- SAE2; DNA repair protein endonuclease SAE2/CtIP C-terminus
- pfam10482
Location:20 → 138
- CtIP_N; tumor-suppressor protein CtIP N-terminal domain
-
NM_203292.2 → NP_976037.1 DNA endonuclease RBBP8 isoform b
See identical proteins and their annotated locations for NP_976037.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and lacks an alternate exon compared to variant 1, that causes a frameshift. The resulting isoform (b) is shorter and has a distinct C-terminus compared to isoform a.
- Source sequence(s)
-
AC091147, BC001170, BX648221, U72066
- Consensus CDS
-
CCDS11874.1
- UniProtKB/TrEMBL
-
I6L8A6
- Related
- ENSP00000382630.2, ENST00000399725.6
- Conserved Domains (1) summary
-
- pfam10482
Location:20 → 138
- CtIP_N; Tumour-suppressor protein CtIP N-terminal domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000018.10 Reference GRCh38.p14 Primary Assembly
- Range
-
22914139..23026486
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047437728.1 → XP_047293684.1 DNA endonuclease RBBP8 isoform X1
- UniProtKB/Swiss-Prot
- A6NKN2, A8K8W6, E7ETY1, O75371, Q8NHQ3, Q99708
- UniProtKB/TrEMBL
-
I6L8A6
-
XM_006722519.3 → XP_006722582.1 DNA endonuclease RBBP8 isoform X1
See identical proteins and their annotated locations for XP_006722582.1
- UniProtKB/Swiss-Prot
- A6NKN2, A8K8W6, E7ETY1, O75371, Q8NHQ3, Q99708
- UniProtKB/TrEMBL
-
I6L8A6
- Conserved Domains (2) summary
-
- pfam08573
Location:797 → 857
- SAE2; DNA repair protein endonuclease SAE2/CtIP C-terminus
- pfam10482
Location:20 → 138
- CtIP_N; tumor-suppressor protein CtIP N-terminal domain
-
XM_011526132.3 → XP_011524434.1 DNA endonuclease RBBP8 isoform X1
See identical proteins and their annotated locations for XP_011524434.1
- UniProtKB/Swiss-Prot
- A6NKN2, A8K8W6, E7ETY1, O75371, Q8NHQ3, Q99708
- UniProtKB/TrEMBL
-
I6L8A6
- Conserved Domains (2) summary
-
- pfam08573
Location:797 → 857
- SAE2; DNA repair protein endonuclease SAE2/CtIP C-terminus
- pfam10482
Location:20 → 138
- CtIP_N; tumor-suppressor protein CtIP N-terminal domain
-
XM_006722520.3 → XP_006722583.1 DNA endonuclease RBBP8 isoform X1
See identical proteins and their annotated locations for XP_006722583.1
- UniProtKB/Swiss-Prot
- A6NKN2, A8K8W6, E7ETY1, O75371, Q8NHQ3, Q99708
- UniProtKB/TrEMBL
-
I6L8A6
- Conserved Domains (2) summary
-
- pfam08573
Location:797 → 857
- SAE2; DNA repair protein endonuclease SAE2/CtIP C-terminus
- pfam10482
Location:20 → 138
- CtIP_N; tumor-suppressor protein CtIP N-terminal domain
-
XM_006722521.3 → XP_006722584.1 DNA endonuclease RBBP8 isoform X1
See identical proteins and their annotated locations for XP_006722584.1
- UniProtKB/Swiss-Prot
- A6NKN2, A8K8W6, E7ETY1, O75371, Q8NHQ3, Q99708
- UniProtKB/TrEMBL
-
I6L8A6
- Conserved Domains (2) summary
-
- pfam08573
Location:797 → 857
- SAE2; DNA repair protein endonuclease SAE2/CtIP C-terminus
- pfam10482
Location:20 → 138
- CtIP_N; tumor-suppressor protein CtIP N-terminal domain
-
XM_047437729.1 → XP_047293685.1 DNA endonuclease RBBP8 isoform X2
- UniProtKB/TrEMBL
-
I6L8A6
-
XM_005258325.4 → XP_005258382.1 DNA endonuclease RBBP8 isoform X2
- UniProtKB/TrEMBL
-
I6L8A6
- Conserved Domains (1) summary
-
- pfam10482
Location:20 → 138
- CtIP_N; Tumour-suppressor protein CtIP N-terminal domain
-
XM_047437727.1 → XP_047293683.1 DNA endonuclease RBBP8 isoform X1
- UniProtKB/Swiss-Prot
- A6NKN2, A8K8W6, E7ETY1, O75371, Q8NHQ3, Q99708
- UniProtKB/TrEMBL
-
I6L8A6
-
XM_047437731.1 → XP_047293687.1 DNA endonuclease RBBP8 isoform X2
- UniProtKB/TrEMBL
-
I6L8A6
-
XM_047437730.1 → XP_047293686.1 DNA endonuclease RBBP8 isoform X2
- UniProtKB/TrEMBL
-
I6L8A6
-
XM_047437732.1 → XP_047293688.1 DNA endonuclease RBBP8 isoform X3
- UniProtKB/TrEMBL
-
I6L8A6
Alternate T2T-CHM13v2.0
Genomic
-
NC_060942.1 Alternate T2T-CHM13v2.0
- Range
-
22991142..23219842
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054318960.1 → XP_054174935.1 DNA endonuclease RBBP8 isoform X1
- UniProtKB/Swiss-Prot
- A6NKN2, A8K8W6, E7ETY1, O75371, Q8NHQ3, Q99708
- UniProtKB/TrEMBL
-
I6L8A6
-
XM_054318958.1 → XP_054174933.1 DNA endonuclease RBBP8 isoform X1
- UniProtKB/Swiss-Prot
- A6NKN2, A8K8W6, E7ETY1, O75371, Q8NHQ3, Q99708
- UniProtKB/TrEMBL
-
I6L8A6
-
XM_054318959.1 → XP_054174934.1 DNA endonuclease RBBP8 isoform X1
- UniProtKB/Swiss-Prot
- A6NKN2, A8K8W6, E7ETY1, O75371, Q8NHQ3, Q99708
- UniProtKB/TrEMBL
-
I6L8A6
-
XM_054318961.1 → XP_054174936.1 DNA endonuclease RBBP8 isoform X2
- UniProtKB/TrEMBL
-
I6L8A6
-
XM_054318956.1 → XP_054174931.1 DNA endonuclease RBBP8 isoform X1
- UniProtKB/Swiss-Prot
- A6NKN2, A8K8W6, E7ETY1, O75371, Q8NHQ3, Q99708
- UniProtKB/TrEMBL
-
I6L8A6
-
XM_054318962.1 → XP_054174937.1 DNA endonuclease RBBP8 isoform X2
- UniProtKB/TrEMBL
-
I6L8A6
-
XM_054318957.1 → XP_054174932.1 DNA endonuclease RBBP8 isoform X1
- UniProtKB/Swiss-Prot
- A6NKN2, A8K8W6, E7ETY1, O75371, Q8NHQ3, Q99708
- UniProtKB/TrEMBL
-
I6L8A6
-
XM_054318964.1 → XP_054174939.1 DNA endonuclease RBBP8 isoform X2
- UniProtKB/TrEMBL
-
I6L8A6
-
XM_054318963.1 → XP_054174938.1 DNA endonuclease RBBP8 isoform X2
- UniProtKB/TrEMBL
-
I6L8A6
-
XM_054318965.1 → XP_054174940.1 DNA endonuclease RBBP8 isoform X3
- UniProtKB/TrEMBL
-
I6L8A6