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    TOX high mobility group box protein, putative (DUF1635) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817418, updated on 18-Sep-2024

    Summary

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    Official Full Name
    TOX high mobility group box protein, putative (DUF1635)
    Primary source
    TAIR:AT2G28690
    Locus tag
    AT2G28690
    See related
    Araport:AT2G28690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T8O18.2; T8O18_2
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (12306885..12308643, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Disease resistance-responsive (dirigent-like protein) family protein Neighboring gene RmlC-like cupins superfamily protein Neighboring gene AGAMOUS-like 46 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_128430.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    TOX high mobility group box protein, putative (DUF1635)
    NP_180437.2
    • Protein of unknown function (DUF1635); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1635 (InterPro:IPR012862); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1635) (TAIR:AT5G59760.1); Has 114 Blast hits to 114 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      12306885..12308643 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128430.3 → NP_180437.2  TOX high mobility group box protein, putative (DUF1635) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180437.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VQ76, Q8L8B6, Q9SIA6
      Conserved Domains (1) summary
      pfam07795
      Location:12 → 229
      DUF1635; Protein of unknown function (DUF1635)
    Nucleotide Protein
    Heading Accession and Version

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