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    IMPA-7 importin alpha isoform 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819741, updated on 18-Sep-2024

    Summary

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    Official Symbol
    IMPA-7
    Official Full Name
    importin alpha isoform 7
    Primary source
    TAIR:AT3G05720
    Locus tag
    AT3G05720
    See related
    Araport:AT3G05720
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F18C1.1; F18C1_1; importin alpha isoform 7
    Summary
    Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.
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    Genomic context

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    See IMPA-7 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Sequence:
    Chromosome: 3; NC_003074.8 (1687583..1691821, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene nuclear factor Y, subunit A2 Neighboring gene Drought-responsive family protein Neighboring gene ncRNA Neighboring gene syntaxin of plants 43 Neighboring gene hypothetical protein (DUF3511) Neighboring gene S locus-related glycoprotein 1 (SLR1) binding pollen coat protein family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001337604.1
    NM_111446.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables nuclear import signal receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    importin alpha isoform 7
    NP_001319482.1
    • importin alpha isoform 7 (IMPA-7); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 3085 Blast hits to 2425 proteins in 261 species: Archae - 0; Bacteria - 4; Metazoa - 1320; Fungi - 449; Plants - 724; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1687583..1691821 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337604.1 → NP_001319482.1  importin alpha isoform 7 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M9X7
      UniProtKB/TrEMBL
      A0A178VAR7, A0A5S9X9E9, A0A654F618
      Conserved Domains (2) summary
      COG5064
      Location:24 → 489
      SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
      sd00043
      Location:99 → 131
      ARM; armadillo repeat [structural motif]

    2. NM_111446.2 → NP_187223.1  importin alpha isoform 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187223.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M9X7
      UniProtKB/TrEMBL
      A0A178VAR7, A0A5S9X9E9, A0A654F618
      Conserved Domains (2) summary
      COG5064
      Location:24 → 489
      SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
      sd00043
      Location:99 → 131
      ARM; armadillo repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M9X7.1

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