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    magnesium transporter NIPA (DUF803) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827014, updated on 18-Sep-2024

    Summary

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    Official Full Name
    magnesium transporter NIPA (DUF803)
    Primary source
    TAIR:AT4G13800
    Locus tag
    AT4G13800
    See related
    Araport:AT4G13800
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F18A5.190; F18A5_190
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    9
    Sequence:
    Chromosome: 4; NC_003075.7 (8001795..8004767, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene methionine-tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS Neighboring gene SAUR-like auxin-responsive protein family Neighboring gene receptor like protein 47 Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene DNAJ-like 20

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. Nühse TS, et al. Mol Cell Proteomics, 2003 Nov. PMID 14506206
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001340877.1
    NM_001340878.1
    NM_001340879.1
    NM_001340880.1
    NM_001340881.1
    NM_001340882.1
    NM_001340883.1
    NM_001340884.1
    NM_001340885.1
    NM_117454.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables magnesium ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    magnesium transporter NIPA (DUF803)
    NP_001319923.1
    • Protein of unknown function (DUF803); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT3G23870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      8001795..8004767 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001340877.1 → NP_001319923.1  magnesium transporter NIPA (DUF803) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3LFA3, Q8LA45, Q9SVN3
      UniProtKB/TrEMBL
      A0A178V202, A0A5S9XS41, A0A654FNZ8
      Conserved Domains (1) summary
      pfam05653
      Location:7 → 299
      Mg_trans_NIPA; Magnesium transporter NIPA

    2. NM_001340878.1 → NP_001327957.1  magnesium transporter NIPA (DUF803) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V086, A0A1P8B356

    3. NM_001340879.1 → NP_001327956.1  magnesium transporter NIPA (DUF803) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V086, A0A1P8B362
      Conserved Domains (1) summary
      cl23754
      Location:7 → 235
      EamA; EamA-like transporter family

    4. NM_001340881.1 → NP_001327952.1  magnesium transporter NIPA (DUF803) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3LFA3, Q8LA45, Q9SVN3
      UniProtKB/TrEMBL
      A0A178V202, A0A5S9XS41, A0A654FNZ8
      Conserved Domains (1) summary
      pfam05653
      Location:7 → 299
      Mg_trans_NIPA; Magnesium transporter NIPA

    5. NM_001340880.1 → NP_001327953.1  magnesium transporter NIPA (DUF803) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V086, A0A1P8B362
      Conserved Domains (1) summary
      cl23754
      Location:7 → 235
      EamA; EamA-like transporter family

    6. NM_001340884.1 → NP_001327951.1  magnesium transporter NIPA (DUF803) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3LFA3, Q8LA45, Q9SVN3
      UniProtKB/TrEMBL
      A0A178V202, A0A5S9XS41, A0A654FNZ8
      Conserved Domains (1) summary
      pfam05653
      Location:7 → 299
      Mg_trans_NIPA; Magnesium transporter NIPA

    7. NM_001340882.1 → NP_001327955.1  magnesium transporter NIPA (DUF803) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V086, A0A1P8B356

    8. NM_001340883.1 → NP_001327954.1  magnesium transporter NIPA (DUF803) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V086, A0A1P8B362
      Conserved Domains (1) summary
      cl23754
      Location:7 → 235
      EamA; EamA-like transporter family

    9. NM_117454.2 → NP_567411.1  magnesium transporter NIPA (DUF803) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567411.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3LFA3, Q8LA45, Q9SVN3
      UniProtKB/TrEMBL
      A0A178V202, A0A5S9XS41, A0A654FNZ8
      Conserved Domains (1) summary
      pfam05653
      Location:7 → 299
      Mg_trans_NIPA; Magnesium transporter NIPA

    10. NM_001340885.1 → NP_001327950.1  magnesium transporter NIPA (DUF803) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V086, A0A1P8B362
      Conserved Domains (1) summary
      cl23754
      Location:7 → 235
      EamA; EamA-like transporter family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B3LFA3.1

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