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    NARA5 pfkB-like carbohydrate kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828871, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NARA5
    Official Full Name
    pfkB-like carbohydrate kinase family protein
    Primary source
    TAIR:AT4G27600
    Locus tag
    AT4G27600
    See related
    Araport:AT4G27600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    GENES NECESSARY FOR THE ACHIEVEMENT OF RUBISCO ACCUMULATION 5; GENES NECESSARY FOR THE ACHIEVEMENT OF RUBISCO ACCUMULATION 5; T29A15.90; T29A15_90
    Summary
    Encodes a phosphofructokinase B-type carbohydrate kinase family protein, NARA5. Regulates photosynthetic gene expression.
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    Genomic context

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    See NARA5 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (13782213..13785134, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene WEB family protein (DUF827) Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene intracellular protein transporter Neighboring gene intracellular protein transporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A phosphofructokinase B-type carbohydrate kinase family protein, NARA5, for massive expressions of plastid-encoded photosynthetic genes in Arabidopsis. Ogawa T, et al. Plant Physiol, 2009 Sep. PMID 19587101, Free PMC Article
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. These results strongly suggest that NARA5 is indispensable for hyperexpression of photosynthetic genes encoded in the plastid genome, particularly rbcL. [NARA5]
      Title: A phosphofructokinase B-type carbohydrate kinase family protein, NARA5, for massive expressions of plastid-encoded photosynthetic genes in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_118896.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within photosynthesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    pfkB-like carbohydrate kinase family protein
    NP_567780.1
    • GENES NECESSARY FOR THE ACHIEVEMENT OF RUBISCO ACCUMULATION 5 (NARA5); CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G19600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13782213..13785134 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118896.3 → NP_567780.1  pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567780.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UTR0, A0A5S9XWE6, Q940Y6
      Conserved Domains (1) summary
      PLN02813
      Location:41 → 471
      PLN02813; pfkB-type carbohydrate kinase family protein
    Nucleotide Protein
    Heading Accession and Version

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