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    Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830481, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
    Primary source
    TAIR:AT5G05960
    Locus tag
    AT5G05960
    See related
    Araport:AT5G05960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K18J17.13; K18J17_13
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (1789538..1790833)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ROP guanine nucleotide exchange factor 5 Neighboring gene tRNA-Asp Neighboring gene maternal effect embryo arrest 60 Neighboring gene cell wall RBR3-like protein Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene DHFS-FPGS homolog B Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_120678.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables fatty acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in systemic acquired resistance IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
    NP_568160.1
    • Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G53980.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      1789538..1790833
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120678.3 → NP_568160.1  Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568160.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJ36, Q8LBY9
      Conserved Domains (1) summary
      cd00010
      Location:41 → 101
      AAI_LTSS; Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins. ...
    Nucleotide Protein
    Heading Accession and Version

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