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    IQD11 IQ-domain 11 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831188, updated on 18-Sep-2024

    Summary

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    Official Symbol
    IQD11
    Official Full Name
    IQ-domain 11
    Primary source
    TAIR:AT5G13460
    Locus tag
    AT5G13460
    See related
    Araport:AT5G13460
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    IQ-domain 11; T22N19.110; T22N19_110
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    Genomic context

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    See IQD11 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (4315759..4318414)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Ubiquinol-cytochrome C reductase iron-sulfur subunit Neighboring gene Ubiquinol-cytochrome C reductase iron-sulfur subunit Neighboring gene delta subunit of Mt ATP synthase Neighboring gene uncharacterized protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dual role for phospholipid:diacylglycerol acyltransferase: enhancing fatty acid synthesis and diverting fatty acids from membrane lipids to triacylglycerol in Arabidopsis leaves. Fan J, et al. Plant Cell, 2013 Sep. PMID 24076979, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. PDAT1 plays a critical role in TAG synthesis in Arabidopsis leaves. Overexpression of PDAT1 enhances both fatty acid (FA) and triacylglycerol (TAG) synthesis in leaves.
      Title: Dual role for phospholipid:diacylglycerol acyltransferase: enhancing fatty acid synthesis and diverting fatty acids from membrane lipids to triacylglycerol in Arabidopsis leaves.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_121349.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    IQ-domain 11
    NP_196850.1
    • IQ-domain 11 (IQD11); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 12 (TAIR:AT5G03960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      4315759..4318414
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121349.4 → NP_196850.1  IQ-domain 11 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196850.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LYR0
      UniProtKB/TrEMBL
      A0A178UP10
      Conserved Domains (2) summary
      smart00015
      Location:113 → 131
      IQ; Calmodulin-binding motif
      pfam13178
      Location:319 → 366
      DUF4005; Protein of unknown function (DUF4005)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LYR0.1

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