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    PFD3 prefoldin 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835011, updated on 18-Sep-2024

    Summary

    Official Symbol
    PFD3
    Official Full Name
    prefoldin 3
    Primary source
    TAIR:AT5G49510
    Locus tag
    AT5G49510
    See related
    Araport:AT5G49510
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K6M13.5; K6M13_5; prefoldin 3
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    Genomic context

    See PFD3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (20080600..20083042)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene AGAMOUS-like 83 Neighboring gene Signal recognition particle, SRP54 subunit protein Neighboring gene WRKY DNA-binding protein 48 Neighboring gene miscRNA Neighboring gene ncRNA

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001036968.2
    NM_124328.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to gibberellin stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_negative_effect cold acclimation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cortical microtubule organization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_positive_effect mRNA processing ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in protein folding IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to cold IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    acts_upstream_of_or_within response to salt stress IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of prefoldin complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    prefoldin 3
    NP_001032045.1
    • prefoldin 3 (PFD3); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin, subunit 3 (InterPro:IPR016655); Has 406 Blast hits to 406 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 133; Plants - 37; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink).
    NP_199762.1
    • prefoldin 3 (PFD3); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin, subunit 3 (InterPro:IPR016655); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      20080600..20083042
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124328.3NP_199762.1  prefoldin 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199762.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P57741
      UniProtKB/TrEMBL
      A0A178U9X4, A0A654G9G6, B9DGC8
      Conserved Domains (1) summary
      pfam02996
      Location:53173
      Prefoldin; Prefoldin subunit
    2. NM_001036968.2NP_001032045.1  prefoldin 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001032045.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P57741
      UniProtKB/TrEMBL
      A0A178U9X4, A0A654G9G6, B9DGC8
      Conserved Domains (1) summary
      pfam02996
      Location:53173
      Prefoldin; Prefoldin subunit