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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference assembly
Genomic
-
NC_003076.8 Reference assembly
- Range
-
4345202..4354723
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_121356.3 → NP_196857.2 protein kinases;ubiquitin-protein ligase [Arabidopsis thaliana]
See identical proteins and their annotated locations for NP_196857.2
Status: REVIEWED
- UniProtKB/Swiss-Prot
- Q27YP2, Q9FY47, Q9FY48
- UniProtKB/TrEMBL
- A0A178URJ0, A0A654G0V7
- Conserved Domains (6) summary
-
- smart00220
Location:138 → 424
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- PHA03095
Location:517 → 857
- PHA03095; ankyrin-like protein; Provisional
- COG0666
Location:427 → 571
- ANKYR; Ankyrin repeat [Signal transduction mechanisms]
- sd00045
Location:688 → 722
- ANK; ANK repeat [structural motif]
- cd16568
Location:9 → 56
- RING-HC_ScPSH1_like; RING finger, HC subclass, found in Saccharomyces cerevisiae POB3/SPT16 histone-associated protein 1 (ScPSH1), Arabidopsis thaliana Protein KEEP ON GOING (AtKEG) and similar proteins
- pfam18346
Location:1560 → 1617
- SH3_15; Mind bomb SH3 repeat domain
-
NM_001203374.1 → NP_001190303.1 protein kinases;ubiquitin-protein ligase [Arabidopsis thaliana]
See identical proteins and their annotated locations for NP_001190303.1
Status: REVIEWED
- UniProtKB/TrEMBL
- A0A178UP88, F4K3Z6
- Conserved Domains (7) summary
-
- smart00220
Location:138 → 424
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- cd00204
Location:506 → 633
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- cd14014
Location:138 → 432
- STKc_PknB_like; Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins
- pfam12796
Location:515 → 610
- Ank_2; Ankyrin repeats (3 copies)
- pfam13445
Location:10 → 53
- zf-RING_UBOX; RING-type zinc-finger
- pfam13857
Location:599 → 654
- Ank_5; Ankyrin repeats (many copies)
- sd00045
Location:688 → 721
- ANK; ANK repeat [structural motif]