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    FXG1 alpha-fucosidase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843109, updated on 18-Sep-2024

    Summary

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    Official Symbol
    FXG1
    Official Full Name
    alpha-fucosidase 1
    Primary source
    TAIR:AT1G67830
    Locus tag
    AT1G67830
    See related
    Araport:AT1G67830
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    alpha-fucosidase 1; Arabidopsis thaliana alpha-fucosidase 1; ATFXG1; F12A21.4; F12A21_4
    Summary
    Encodes a protein with alpha-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFXG1 was able to remove the t-fucosyl residues of XXFG xyloglucan oligosaccharides.
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    Genomic context

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    See FXG1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (25431549..25433091, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene sulfur E2 Neighboring gene Protein phosphatase 2C family protein Neighboring gene chloroplast sensor kinase Neighboring gene lysine ketoglutarate reductase trans-splicing protein (DUF707)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AtFXG1, an Arabidopsis gene encoding alpha-L-fucosidase active against fucosylated xyloglucan oligosaccharides. de La Torre F, et al. Plant Physiol, 2002 Jan. PMID 11788770, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_105451.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables alpha-L-fucosidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables hydrolase activity, acting on ester bonds IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    alpha-fucosidase 1
    NP_176949.1
    • alpha-fucosidase 1 (FXG1); FUNCTIONS IN: alpha-L-fucosidase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3145 Blast hits to 3097 proteins in 87 species: Archae - 0; Bacteria - 62; Metazoa - 0; Fungi - 3; Plants - 3080; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25431549..25433091 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105451.4 → NP_176949.1  alpha-fucosidase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176949.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q681W5, Q9FXE5
      UniProtKB/TrEMBL
      A0A178W726
      Conserved Domains (1) summary
      cd01837
      Location:29 → 364
      SGNH_plant_lipase_like; SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FXE5.1

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