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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_030403.1 RefSeqGene
- Range
-
5012..35114
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_005778.4 → NP_005769.1 RNA-binding protein 5
See identical proteins and their annotated locations for NP_005769.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and is protein coding.
- Source sequence(s)
-
AC104450, AF091263, BM985111, CN293007, DA776815, DB080737
- Consensus CDS
-
CCDS2810.1
- UniProtKB/Swiss-Prot
- B2RA45, B4DM16, B4DMF9, B4DZ63, P52756, Q93021, Q9BU14, Q9HDA6, Q9UKY8, Q9UL24
- Related
- ENSP00000343054.3, ENST00000347869.8
- Conserved Domains (7) summary
-
- COG0724
Location:40 → 181
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12752
Location:93 → 179
- RRM1_RBM5; RNA recognition motif 1 in vertebrate RNA-binding protein 5 (RBM5)
- cd12755
Location:229 → 314
- RRM2_RBM5; RNA recognition motif 2 in vertebrate RNA-binding protein 5 (RBM5)
- sd00025
Location:185 → 204
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- pfam00641
Location:181 → 210
- zf-RanBP; Zn-finger in Ran binding protein and others
- pfam01585
Location:743 → 787
- G-patch; G-patch domain
- cd16168
Location:455 → 510
- OCRE_RBM5; OCRE domain found in RNA-binding protein 5 (RBM5) and similar proteins
RNA
-
NR_036627.3 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC104450, AK297249, AU129811, BM985111, BX441555, DB080737, DR762951
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
50088919..50119021
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011533262.3 → XP_011531564.1 RNA-binding protein 5 isoform X3
- Conserved Domains (7) summary
-
- COG0724
Location:40 → 181
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12752
Location:93 → 179
- RRM1_RBM5; RNA recognition motif 1 in vertebrate RNA-binding protein 5 (RBM5)
- cd12755
Location:229 → 314
- RRM2_RBM5; RNA recognition motif 2 in vertebrate RNA-binding protein 5 (RBM5)
- sd00025
Location:185 → 204
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- pfam00641
Location:181 → 210
- zf-RanBP; Zn-finger in Ran binding protein and others
- pfam01585
Location:669 → 713
- G-patch; G-patch domain
- cd16168
Location:455 → 510
- OCRE_RBM5; OCRE domain found in RNA-binding protein 5 (RBM5) and similar proteins
-
XM_006712917.3 → XP_006712980.1 RNA-binding protein 5 isoform X1
- Conserved Domains (8) summary
-
- COG0724
Location:40 → 181
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12752
Location:93 → 179
- RRM1_RBM5; RNA recognition motif 1 in vertebrate RNA-binding protein 5 (RBM5)
- cd12755
Location:229 → 314
- RRM2_RBM5; RNA recognition motif 2 in vertebrate RNA-binding protein 5 (RBM5)
- sd00025
Location:185 → 204
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- pfam00641
Location:181 → 210
- zf-RanBP; Zn-finger in Ran binding protein and others
- pfam01585
Location:684 → 728
- G-patch; G-patch domain
- cd16074
Location:425 → 431
- OCRE; OCRE repeat 4 [structural motif]
- cl23757
Location:423 → 451
- OCRE; OCRE domain
-
XM_047447138.1 → XP_047303094.1 RNA-binding protein 5 isoform X4
-
XM_011533261.3 → XP_011531563.1 RNA-binding protein 5 isoform X2
- Conserved Domains (4) summary
-
- COG0724
Location:40 → 181
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12752
Location:93 → 179
- RRM1_RBM5; RNA recognition motif 1 in vertebrate RNA-binding protein 5 (RBM5)
- pfam01585
Location:669 → 713
- G-patch; G-patch domain
- cd16168
Location:381 → 436
- OCRE_RBM5; OCRE domain found in RNA-binding protein 5 (RBM5) and similar proteins
-
XM_017005504.3 → XP_016860993.1 RNA-binding protein 5 isoform X5
- Conserved Domains (4) summary
-
- smart00443
Location:608 → 654
- G_patch; glycine rich nucleic binding domain
- smart00360
Location:99 → 171
- RRM; RNA recognition motif
- cd16074
Location:351 → 357
- OCRE; OCRE repeat 4 [structural motif]
- cl23757
Location:349 → 377
- OCRE; OCRE domain
-
XM_047447140.1 → XP_047303096.1 RNA-binding protein 5 isoform X7
-
XM_047447139.1 → XP_047303095.1 RNA-binding protein 5 isoform X6
- UniProtKB/TrEMBL
-
Q59HE6
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
50118235..50148343
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054344846.1 → XP_054200821.1 RNA-binding protein 5 isoform X3
-
XM_054344844.1 → XP_054200819.1 RNA-binding protein 5 isoform X1
-
XM_054344847.1 → XP_054200822.1 RNA-binding protein 5 isoform X4
-
XM_054344845.1 → XP_054200820.1 RNA-binding protein 5 isoform X2
-
XM_054344848.1 → XP_054200823.1 RNA-binding protein 5 isoform X5
-
XM_054344850.1 → XP_054200825.1 RNA-binding protein 5 isoform X7
-
XM_054344849.1 → XP_054200824.1 RNA-binding protein 5 isoform X6
- UniProtKB/TrEMBL
-
Q59HE6