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    LOC105375614 uncharacterized LOC105375614 [ Homo sapiens (human) ]

    Gene ID: 105375614, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC105375614
    Gene description
    uncharacterized LOC105375614
    See related
    Ensembl:ENSG00000222012
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in testis (RPKM 1.2), ovary (RPKM 0.4) and 5 other tissues See more
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    Genomic context

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    See LOC105375614 in Genome Data Viewer
    Location:
    7q36.3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (157613939..157618771)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (158802598..158807430)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr7:157387093-157388292 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:157388362-157388862 Neighboring gene uncharacterized LOC105375615 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:157410237-157410746 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:157414918-157415418 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:157415419-157415919 Neighboring gene protein tyrosine phosphatase receptor type N2 Neighboring gene microRNA 153-2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:157453869-157454368 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:157461523-157462416 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:157462417-157463309 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:157468593-157469378 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:157469379-157470162 Neighboring gene MPRA-validated peak6875 silencer Neighboring gene OCT4 hESC enhancer GRCh37_chr7:157525094-157525825 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:157586225-157586786 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:157588757-157589258 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:157589794-157590294 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:157607483-157607984 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:157619124-157619632 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:157621801-157622674 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:157637302-157638501 Neighboring gene MPRA-validated peak6876 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:157666565-157667400 Neighboring gene PTPRN2 antisense RNA 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:157679661-157680178 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:157689624-157690124 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_97987 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:157725255-157726454 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr7:157748173-157748781 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:157763321-157763527 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:157775009-157775954 Neighboring gene uncharacterized LOC105375613

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    General gene information

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    Clone Names

    • AC005481.5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      157613939..157618771
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_928275.2 RNA Sequence

      Related
      ENST00000409610.1

    2. XR_007060624.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      158802598..158807430
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007078072.1 RNA Sequence

    2. XR_007078073.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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