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    Svs5 seminal vesicle secretory protein 5 [ Mus musculus (house mouse) ]

    Gene ID: 20944, updated on 9-Dec-2024

    Summary

    Official Symbol
    Svs5provided by MGI
    Official Full Name
    seminal vesicle secretory protein 5provided by MGI
    Primary source
    MGI:MGI:98453
    See related
    Ensembl:ENSMUSG00000017004 AllianceGenome:MGI:98453
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Svp1; Svp5; Semg1; Svp-1
    Summary
    Predicted to be located in extracellular region. Predicted to be active in extracellular space. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in genital fat pad adult (RPKM 4.6), testis adult (RPKM 1.2) and 1 other tissue See more
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    Genomic context

    See Svs5 in Genome Data Viewer
    Location:
    2 H3; 2 85.16 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (164174685..164176314)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (164332765..164334394)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene seminal vesicle secretory protein 3A Neighboring gene seminal vesicle secretory protein 6 Neighboring gene microRNA 7678 Neighboring gene secretory leukocyte peptidase inhibitor Neighboring gene STARR-seq mESC enhancer starr_06324 Neighboring gene matrilin 4 Neighboring gene recombination signal binding protein for immunoglobulin kappa J region-like

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Clone Names

    • MGC130266

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    seminal vesicle secretory protein 5
    Names
    SVS V
    SVS protein F
    semenogelin I
    seminal vesicle protein 1
    seminal vesicle protein F
    seminal vesicle secretion 5
    seminal vesicle secretory protein V

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009301.2NP_033327.1  seminal vesicle secretory protein 5 precursor

      See identical proteins and their annotated locations for NP_033327.1

      Status: VALIDATED

      Source sequence(s)
      AK007282, X57139
      Consensus CDS
      CCDS17032.1
      UniProtKB/Swiss-Prot
      P30933
      UniProtKB/TrEMBL
      Q545K7
      Related
      ENSMUSP00000017148.8, ENSMUST00000017148.8

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      164174685..164176314
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)