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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001305808.2 → NP_001292737.1 granzyme N isoform 1 precursor
See identical proteins and their annotated locations for NP_001292737.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the shorter isoform (1).
- Source sequence(s)
-
AC091783
- Consensus CDS
-
CCDS88673.1
- UniProtKB/TrEMBL
-
Q76HN3
- Related
- ENSMUSP00000153137.2, ENSMUST00000225535.2
- Conserved Domains (2) summary
-
- smart00020
Location:20 → 195
- Tryp_SPc; Trypsin-like serine protease
- cd00190
Location:21 → 194
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
-
NM_153052.3 → NP_694692.1 granzyme N isoform 2 precursor
See identical proteins and their annotated locations for NP_694692.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 3' coding region, which results in a frameshift, compared to variant 1. It encodes isoform 2, which has a longer and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC091783
- Consensus CDS
-
CCDS27145.1
- UniProtKB/TrEMBL
-
Q920S1
- Related
- ENSMUSP00000015587.8, ENSMUST00000015587.9
- Conserved Domains (2) summary
-
- smart00020
Location:20 → 241
- Tryp_SPc; Trypsin-like serine protease
- cd00190
Location:21 → 244
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000080.7 Reference GRCm39 C57BL/6J
- Range
-
56403243..56412069 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006519020.2 → XP_006519083.1 granzyme N isoform X1
- Conserved Domains (1) summary
-
- cd00190
Location:5 → 228
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
-
XM_017316021.2 → XP_017171510.1 granzyme N isoform X3
- Conserved Domains (1) summary
-
- cd00190
Location:21 → 114
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
-
XM_017316020.1 → XP_017171509.1 granzyme N isoform X2
- Conserved Domains (1) summary
-
- cd00190
Location:21 → 114
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...