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    CG6972 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42684, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG6972provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039008
    Locus tag
    Dmel_CG6972
    See related
    AllianceGenome:FB:FBgn0039008
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG6972
    Summary
    Involved in muscle system process. Is expressed in adult head; larval muscle system; larval somatic muscle cell; somatic muscle primordium; and visceral muscle primordium. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG6972 in Genome Data Viewer
    Location:
    94C1-94C2; 3-76 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (22702007..22704338)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (18527729..18530060)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene cardinal Neighboring gene Cytochrome P450 6d4 Neighboring gene Crustacean cardioactive peptide Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene winged eye

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. mef2 activity levels differentially affect gene expression during Drosophila muscle development. Elgar SJ, et al. Proc Natl Acad Sci U S A, 2008 Jan 22. PMID 18198273, Free PMC Article
    2. Using qualitative probability in reverse-engineering gene regulatory networks. Ibrahim ZM, et al. IEEE/ACM Trans Comput Biol Bioinform, 2011 Mar-Apr. PMID 20876933
    3. Differences in Postmating Transcriptional Responses between Conspecific and Heterospecific Matings in Drosophila. Ahmed-Braimah YH, et al. Mol Biol Evol, 2021 Mar 9. PMID 33035303, Free PMC Article
    4. Muscle wasted: a novel component of the Drosophila histone locus body required for muscle integrity. Bulchand S, et al. J Cell Sci, 2010 Aug 15. PMID 20647374
    5. Expression profiling of a hypercontraction-induced myopathy in Drosophila suggests a compensatory cytoskeletal remodeling response. Montana ES, et al. J Biol Chem, 2006 Mar 24. PMID 16415344

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in muscle system process IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in muscle system process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG6972-PA
    CG6972-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      22702007..22704338
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001316516.1 → NP_001303445.1  uncharacterized protein Dmel_CG6972, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A126GV06, Q8MSS4

    2. NM_142827.2 → NP_651084.1  uncharacterized protein Dmel_CG6972, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651084.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MSS4, Q9VCV9
      Related
      FBpp0083698
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A126GV06 A0A126GV06
    Q8MSS4 Q8MSS4
    Q9VCV9 Q9VCV9

    Gene LinkOut

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