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    whe what else [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33121, updated on 11-Sep-2024

    Summary

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    Official Symbol
    wheprovided by FlyBase
    Official Full Name
    what elseprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031176
    Locus tag
    Dmel_CG1678
    See related
    AllianceGenome:FB:FBgn0031176
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:GH04760; CG1678; Dmel\CG1678
    Orthologs
    all
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    Genomic context

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    See whe in Genome Data Viewer
    Location:
    20A1-20A1; 1-66 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (21402339..21402772, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (21273366..21273799, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45500 Neighboring gene la costa Neighboring gene long non-coding RNA:CR45003 Neighboring gene Dpr-interacting protein beta Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Ras-Erk-ETS-Signaling Pathway Is a Drug Target for Longevity. Slack C, et al. Cell, 2015 Jul 2. PMID 26119340, Free PMC Article
    2. Cluster-Based Analysis of Retinitis Pigmentosa Modifiers Using Drosophila Eye Size and Gene Expression Data. Amstutz J, et al. Genes (Basel), 2022 Feb 21. PMID 35205430, Free PMC Article
    3. Dihydromyricetin promotes longevity and activates the transcription factors FOXO and AOP in Drosophila. Fan X, et al. Aging (Albany NY), 2020 Dec 3. PMID 33291074, Free PMC Article
    4. Enterocyte Purge and Rapid Recovery Is a Resilience Reaction of the Gut Epithelium to Pore-Forming Toxin Attack. Lee KZ, et al. Cell Host Microbe, 2016 Dec 14. PMID 27889464
    5. Identifying candidate genes affecting developmental time in Drosophila melanogaster: pervasive pleiotropy and gene-by-environment interaction. Mensch J, et al. BMC Dev Biol, 2008 Aug 8. PMID 18687152, Free PMC Article

    See all (35) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    what else
    Names
    CG1678-PA
    CG1678-PB
    whe-PA
    whe-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      21402339..21402772 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298590.1 → NP_001285519.1  what else, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285519.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VRI1

    2. NM_134607.2 → NP_608451.1  what else, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608451.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VRI1
      Related
      FBpp0076915
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MSK3 Q8MSK3
    Q9VRI1 Q9VRI1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
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