U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG13243 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34933, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG13243provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0028903
    Locus tag
    Dmel_CG13243
    See related
    AllianceGenome:FB:FBgn0028903
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BG:DS02252.1; Dmel\CG13243
    Summary
    Is expressed in spermatozoon. Human ortholog(s) of this gene implicated in spermatogenic failure 54. Orthologous to human CATIP (ciliogenesis associated TTC17 interacting protein). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG13243 in Genome Data Viewer
    Location:
    35D4-35D5; 2-51 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (15852592..15854110)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (15852592..15854110)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45694 Neighboring gene long non-coding RNA:CR43763 Neighboring gene Tektin A Neighboring gene long non-coding RNA:CR42791

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome-Wide Association Study of Circadian Behavior in Drosophila melanogaster. Harbison ST, et al. Behav Genet, 2019 Jan. PMID 30341464, Free PMC Article
    2. Comparative analysis of argonaute-dependent small RNA pathways in Drosophila. Zhou R, et al. Mol Cell, 2008 Nov 21. PMID 19026789, Free PMC Article
    3. An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster: the Adh region. Ashburner M, et al. Genetics, 1999 Sep. PMID 10471707, Free PMC Article
    4. Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes. Hosono C, et al. Nat Cell Biol, 2015 Dec. PMID 26551273
    5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG13243-PA
    CG13243-PB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      15852592..15854110
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273546.1 → NP_001260475.1  uncharacterized protein Dmel_CG13243, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260475.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MTB0, Q9V3B1
      Conserved Domains (1) summary
      cl02594
      Location:371 → 404
      DD_R_PKA; Dimerization/Docking domain of the Regulatory subunit of cAMP-dependent protein kinase and similar domains

    2. NM_135925.3 → NP_609769.2  uncharacterized protein Dmel_CG13243, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609769.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MTB0, Q9V3B1
      Related
      FBpp0080345
      Conserved Domains (1) summary
      cl02594
      Location:371 → 404
      DD_R_PKA; Dimerization/Docking domain of the Regulatory subunit of cAMP-dependent protein kinase and similar domains
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9V3B1 Q9V3B1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools