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    CG11380 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31065, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG11380provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0040359
    Locus tag
    Dmel_CG11380
    See related
    AllianceGenome:FB:FBgn0040359
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG11380; EG:BACR42I17.7
    Summary
    Is expressed in several structures, including embryonic dorsal epidermis; embryonic ventral epidermis; embryonic/larval posterior spiracle; gonad; and inclusive hindgut primordium. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG11380 in Genome Data Viewer
    Location:
    1E4-1E4; 1-0.1 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (1191308..1196660)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (1085341..1090693)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of cis-regulatory modules encoding temporal dynamics during development. Potier D, et al. BMC Genomics, 2014 Jun 27. PMID 24972496, Free PMC Article
    2. Double-stranded RNA is pathogenic in Drosophila models of expanded repeat neurodegenerative diseases. Lawlor KT, et al. Hum Mol Genet, 2011 Oct 1. PMID 21724553
    3. RNA-seq reveals post-transcriptional regulation of Drosophila insulin-like peptide dilp8 and the neuropeptide-like precursor Nplp2 by the exoribonuclease Pacman/XRN1. Jones CI, et al. Nucleic Acids Res, 2016 Jan 8. PMID 26656493, Free PMC Article
    4. Somatic, germline and sex hierarchy regulated gene expression during Drosophila metamorphosis. Lebo MS, et al. BMC Genomics, 2009 Feb 13. PMID 19216785, Free PMC Article
    5. Gene expression profiling of brakeless mutant Drosophila embryos. Crona F, et al. Data Brief, 2015 Dec. PMID 26509186, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG11380-PA
    CG11380-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      1191308..1196660
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001297838.1 → NP_001284767.1  uncharacterized protein Dmel_CG11380, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284767.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SZR3, Q9U1L7, Q9W5A9
      Conserved Domains (1) summary
      pfam01456
      Location:3 → 93
      Mucin; Mucin-like glycoprotein

    2. NM_130535.3 → NP_569891.1  uncharacterized protein Dmel_CG11380, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_569891.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SZR3, Q9U1L7, Q9W5A9
      Related
      FBpp0070194
      Conserved Domains (1) summary
      pfam01456
      Location:3 → 93
      Mucin; Mucin-like glycoprotein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9U1L7 Q9U1L7
    Q9W5A9 Q9W5A9

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