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    Obp19d Odorant-binding protein 19d [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33040, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Obp19dprovided by FlyBase
    Official Full Name
    Odorant-binding protein 19dprovided by FlyBase
    Primary source
    FLYBASE:FBgn0011280
    Locus tag
    Dmel_CG1668
    See related
    AllianceGenome:FB:FBgn0011280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    19d; BcDNA:HL07789; BcDNA:RH68082; CG1668; DmelObp19d; Dmel\CG1668; OBP19d; PB-PRP2; PBP2; pbprp-2; PBPRP-2; pbprp2; Pbprp2; PBPRP2
    Summary
    Predicted to enable pheromone binding activity. Predicted to be involved in sensory perception of smell. Predicted to be located in extracellular region. Is expressed in several structures, including eo sensory organ accessory cell; labellum; organism subdivision; pseudotrachea; and sense organ. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

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    See Obp19d in Genome Data Viewer
    Location:
    19D1-19D1; 1-64 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (20419613..20420979)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (20290640..20292006)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Odorant-binding protein 19b Neighboring gene Odorant-binding protein 19c Neighboring gene Protein phosphatase 19C Neighboring gene cactin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A putative lipophilic stimulant carrier protein commonly found in the taste and olfactory systems. A unique member of the pheromone-binding protein superfamily. Ozaki M, et al. Eur J Biochem, 1995 May 15. PMID 7601113
    2. Gustatory organs of Drosophila melanogaster: fine structure and expression of the putative odorant-binding protein PBPRP2. Shanbhag SR, et al. Cell Tissue Res, 2001 Jun. PMID 11456419
    3. Expression mosaic of odorant-binding proteins in Drosophila olfactory organs. Shanbhag SR, et al. Microsc Res Tech, 2001 Dec 1. PMID 11754509
    4. A Drosophila protein specific to pheromone-sensing gustatory hairs delays males' copulation attempts. Park SK, et al. Curr Biol, 2006 Jun 6. PMID 16753571
    5. Natural variation, functional pleiotropy and transcriptional contexts of odorant binding protein genes in Drosophila melanogaster. Arya GH, et al. Genetics, 2010 Dec. PMID 20870963, Free PMC Article

    See all (61) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables pheromone binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables pheromone binding NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in sensory perception of smell IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Odorant-binding protein 19d
    Names
    CG1668-PA
    CG1668-PB
    Obp19d-PA
    Obp19d-PB
    Pheromone-binding protein-related protein 2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      20419613..20420979
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078697.3 → NP_523421.2  Odorant-binding protein 19d, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523421.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V4T7, B3DMN4, P54192, Q8MYT1, Q9VR97
      UniProtKB/TrEMBL
      E2DCD4, E2DCD5, E2DCD9, E2DCS0
      Related
      FBpp0076995
      Conserved Domains (1) summary
      pfam01395
      Location:23 → 139
      PBP_GOBP; PBP/GOBP family

    2. NM_176767.2 → NP_788940.1  Odorant-binding protein 19d, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788940.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V4T7, B3DMN4, P54192, Q8MYT1, Q9VR97
      UniProtKB/TrEMBL
      E2DCD4, E2DCD5, E2DCD9, E2DCS0
      Related
      FBpp0076996
      Conserved Domains (1) summary
      pfam01395
      Location:23 → 139
      PBP_GOBP; PBP/GOBP family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P54192.2 P54192

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