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    CG6729 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34484, updated on 9-Dec-2024

    Summary

    Official Symbol
    CG6729provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032296
    Locus tag
    Dmel_CG6729
    See related
    AllianceGenome:FB:FBgn0032296
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG6729
    Summary
    Predicted to be involved in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay. Orthologous to human SMG8 (SMG8 nonsense mediated mRNA decay factor). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See CG6729 in Genome Data Viewer
    Location:
    32A5-32A5; 2-43 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (10740782..10743935, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (10740782..10743935, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Vacuolar H[+] ATPase 16kD subunit 5 Neighboring gene uncharacterized protein Neighboring gene mir-4970 stem loop Neighboring gene uncharacterized protein Neighboring gene mir-9378 stem loop Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Pathways from PubChem

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG6729-PA

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      10740782..10743935 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135605.3NP_609449.1  uncharacterized protein Dmel_CG6729 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609449.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B5RIT4, Q8T4F6, Q9VKQ6
      Related
      FBpp0079708
      Conserved Domains (1) summary
      pfam10220
      Location:25915
      DUF2146; Uncharacterized conserved protein (DUF2146)