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    Sr-CIV Scavenger receptor class C, type IV [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33576, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Sr-CIVprovided by FlyBase
    Official Full Name
    Scavenger receptor class C, type IVprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031547
    Locus tag
    Dmel_CG3212
    See related
    AllianceGenome:FB:FBgn0031547
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG3212; CT10789; Dmel\CG3212; SR-CIV
    Summary
    Predicted to be involved in nervous system development. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Sr-CIV in Genome Data Viewer
    Location:
    23F6-23F6; 2-10 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (3522521..3524056, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (3522521..3524056, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene spindly Neighboring gene Intraflagellar transport 57

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Elevated polymorphism and divergence in the class C scavenger receptors of Drosophila melanogaster and D. simulans. Lazzaro BP. Genetics, 2005 Apr. PMID 15716507, Free PMC Article
    2. Genetic basis of natural variation in D. melanogaster antibacterial immunity. Lazzaro BP, et al. Science, 2004 Mar 19. PMID 15031506
    3. Genetic variation in Drosophila melanogaster resistance to infection: a comparison across bacteria. Lazzaro BP, et al. Genetics, 2006 Nov. PMID 16888344, Free PMC Article
    4. Phagocytosis in Drosophila: From molecules and cellular machinery to physiology. Melcarne C, et al. Insect Biochem Mol Biol, 2019 Jun. PMID 30953686
    5. Analysis of immune-related genes during Nora virus infection of Drosophila melanogaster using next generation sequencing. Lopez W, et al. AIMS Microbiol, 2018. PMID 29707694, Free PMC Article

    See all (41) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    scavenger receptor class C, type IV
    Names
    CG3212-PA
    Sr-CIV-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      3522521..3524056 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_134945.2 → NP_608789.1  scavenger receptor class C, type IV [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608789.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5ELM3, Q9VQS2
      Related
      FBpp0077249
      Conserved Domains (3) summary
      cd06263
      Location:132 → 301
      MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
      pfam00629
      Location:132 → 306
      MAM; MAM domain, meprin/A5/mu
      pfam01033
      Location:336 → 376
      Somatomedin_B; Somatomedin B domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5ELL3 Q5ELL3
    Q5ELL5 Q5ELL5
    Q5ELL6 Q5ELL6
    Q5ELL7 Q5ELL7
    Q5ELL8 Q5ELL8
    Q5ELL9 Q5ELL9
    Q5ELM0 Q5ELM0
    Q5ELM3 Q5ELM3
    Q5ELM4 Q5ELM4
    Q5ELM5 Q5ELM5
    Q5ELM6 Q5ELM6
    Q5ELM7 Q5ELM7
    Q5ELM8 Q5ELM8
    Q5ELM9 Q5ELM9
    Q9VQS2 Q9VQS2

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