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    prelid1a PRELI domain containing 1a [ Danio rerio (zebrafish) ]

    Gene ID: 393337, updated on 9-Dec-2024

    Summary

    Official Symbol
    prelid1aprovided by ZNC
    Official Full Name
    PRELI domain containing 1aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1341
    See related
    Ensembl:ENSDARG00000098671 AllianceGenome:ZFIN:ZDB-GENE-040426-1341
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    PX19; prelid1; zgc:64028
    Summary
    Predicted to enable phosphatidic acid transfer activity. Predicted to be involved in phospholipid transport. Predicted to be active in mitochondrial intermembrane space. Orthologous to human PRELID1 (PRELI domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See prelid1a in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (16034447..16044789)
    105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (15728884..15739226)

    Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 105 Neighboring gene neuropeptide Y receptor Y7 Neighboring gene MAX dimerization protein 3 Neighboring gene ring finger protein 103

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Clone Names

    • MGC64028

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables phosphatidic acid transfer activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in phospholipid transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in mitochondrial intermembrane space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrial intermembrane space IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    PRELI domain containing 1a
    Names
    PRELI domain containing 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200366.2NP_956660.1  PRELI domain containing 1a

      See identical proteins and their annotated locations for NP_956660.1

      Status: PROVISIONAL

      Source sequence(s)
      AY398403
      UniProtKB/TrEMBL
      A0A0R4IZC0, B2GTJ3, Q7T388
      Related
      ENSDARP00000141813.1, ENSDART00000161348.2
      Conserved Domains (1) summary
      pfam04707
      Location:16172
      PRELI; PRELI-like family

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007125.7 Reference GRCz11 Primary Assembly

      Range
      16034447..16044789
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)