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    si:ch211-272n13.3 si:ch211-272n13.3 [ Danio rerio (zebrafish) ]

    Gene ID: 402845, updated on 9-Dec-2024

    Summary

    Official Symbol
    si:ch211-272n13.3provided by ZNC
    Official Full Name
    si:ch211-272n13.3provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-081104-216
    See related
    AllianceGenome:ZFIN:ZDB-GENE-081104-216
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    ankrd26
    Summary
    Human ortholog(s) of this gene implicated in thrombocytopenia. Orthologous to human ANKRD26 (ankyrin repeat domain containing 26). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See si:ch211-272n13.3 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    47
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (3573079..3647269, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (3447364..3521548, complement)

    Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene zgc:194202 Neighboring gene leukotriene B4 receptor 1-like Neighboring gene inner centromere protein Neighboring gene prion protein, related sequence 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    ankyrin repeat domain-containing protein 26
    Names
    ankyrin repeat domain 26

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007136.7 Reference GRCz11 Primary Assembly

      Range
      3573079..3647269 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068217474.1XP_068073575.1  ankyrin repeat domain-containing protein 26 isoform X4

      UniProtKB/TrEMBL
      A0A8M9PYM5
    2. XM_021470587.2XP_021326262.1  ankyrin repeat domain-containing protein 26 isoform X3

      UniProtKB/TrEMBL
      A0A8M9P6L5, A0A8M9PYM5
      Conserved Domains (6) summary
      cd00204
      Location:59184
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:130161
      ANK; ANK repeat [structural motif]
      pfam14915
      Location:13601663
      CCDC144C; CCDC144C protein coiled-coil region
      cl25732
      Location:13412153
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26305
      Location:544842
      XPG_I; XPG I-region
      cl26761
      Location:7051207
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    3. XM_068217473.1XP_068073574.1  ankyrin repeat domain-containing protein 26 isoform X2

    4. XM_068217472.1XP_068073573.1  ankyrin repeat domain-containing protein 26 isoform X1