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    rabl6a RAB, member RAS oncogene family-like 6a [ Danio rerio (zebrafish) ]

    Gene ID: 572091, updated on 9-Dec-2024

    Summary

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    Official Symbol
    rabl6aprovided by ZNC
    Official Full Name
    RAB, member RAS oncogene family-like 6aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-6174
    See related
    AllianceGenome:ZFIN:ZDB-GENE-030131-6174
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    rabl6; cb1047; fi37d12; wu:fi37d12
    Summary
    Predicted to enable GTP binding activity. Is expressed in several structures, including axis; central nervous system; forerunner cell group; hatching gland; and polster. Orthologous to human RABL6 (RAB, member RAS oncogene family like 6). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See rabl6a in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (5603631..5674626, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (5120276..5182355, complement)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene MAPK associated protein 1 Neighboring gene apical junction component 1 homolog Neighboring gene TNF receptor-associated factor 2-like Neighboring gene tenascin Ca

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    rab-like protein 6
    Names
    RAB, member RAS oncogene family-like 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      5603631..5674626 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068221396.1 → XP_068077497.1  rab-like protein 6 isoform X1

    2. XM_695763.10 → XP_700855.3  rab-like protein 6 isoform X3

      UniProtKB/TrEMBL
      A0A8N7T8H2
      Conserved Domains (2) summary
      pfam00071
      Location:45 → 221
      Ras; Ras family
      cl21455
      Location:44 → 221
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    3. XM_005171738.5 → XP_005171795.1  rab-like protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A8M2BIZ7
      Conserved Domains (2) summary
      pfam00071
      Location:45 → 222
      Ras; Ras family
      cl21455
      Location:44 → 222
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    4. XM_068221395.1 → XP_068077496.1  rab-like protein 6 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

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