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    prr15la proline rich 15 like a [ Danio rerio (zebrafish) ]

    Gene ID: 445084, updated on 9-Dec-2024

    Summary

    Official Symbol
    prr15laprovided by ZNC
    Official Full Name
    proline rich 15 like aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040801-218
    See related
    Ensembl:ENSDARG00000025615 AllianceGenome:ZFIN:ZDB-GENE-040801-218
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    atad4a; fj24c06; zgc:91833; wu:fj24c06
    Summary
    Is expressed in lateral line system; otic placode; otic vesicle; and pronephric duct. Orthologous to human PRR15L (proline rich 15 like). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See prr15la in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (24190207..24197268)
    105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (24059659..24066720)

    Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene BEN domain-containing protein 6 Neighboring gene uncharacterized LOC110438603 Neighboring gene si:dkey-110g7.8 Neighboring gene activating transcription factor 4b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    proline-rich protein 15-like protein A
    Names
    ATPase family, AAA domain containing 4a
    cb1069
    protein atad4-A

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001003478.1NP_001003478.1  proline-rich protein 15-like protein A

      See identical proteins and their annotated locations for NP_001003478.1

      Status: PROVISIONAL

      Source sequence(s)
      BC078363
      UniProtKB/Swiss-Prot
      Q6DBU1
      UniProtKB/TrEMBL
      A0A8M9PM83, F1R5F4
      Related
      ENSDARP00000033094.5, ENSDART00000034762.6
      Conserved Domains (1) summary
      pfam15321
      Location:1090
      ATAD4; ATPase family AAA domain containing 4

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007114.7 Reference GRCz11 Primary Assembly

      Range
      24190207..24197268
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394531.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      200558..207926
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_2

    Genomic

    1. NW_018395226.1 Reference GRCz11 ALT_DRER_TU_2

      Range
      19153..26214
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)