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    sult4a1 sulfotransferase family 4A, member 1 [ Danio rerio (zebrafish) ]

    Gene ID: 678517, updated on 9-Dec-2024

    Summary

    Official Symbol
    sult4a1provided by ZNC
    Official Full Name
    sulfotransferase family 4A, member 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060421-2705
    See related
    Ensembl:ENSDARG00000101967 AllianceGenome:ZFIN:ZDB-GENE-060421-2705
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:136828
    Summary
    Predicted to enable sulfotransferase activity. Predicted to be involved in sulfation. Predicted to be active in cytoplasm. Is expressed in brain. Orthologous to human SULT4A1 (sulfotransferase family 4A member 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See sult4a1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (8797139..8810740)
    105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (8796192..8809824)

    Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene tubulin tyrosine ligase-like family, member 12 Neighboring gene uncharacterized LOC137491517 Neighboring gene uncharacterized LOC137491518 Neighboring gene patatin-like phospholipase domain containing 3 Neighboring gene metallophosphoesterase domain containing 1 Neighboring gene signal peptide, CUB domain, EGF-like 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Clone Names

    • MGC136828

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables sulfotransferase activity  
    enables sulfotransferase activity  
    enables transferase activity  
    Process Evidence Code Pubs
    involved_in sulfation  
    Component Evidence Code Pubs
    is_active_in cytoplasm  

    General protein information

    Preferred Names
    sulfotransferase 4A1
    NP_001035334.1
    XP_068075837.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001040244.1 → NP_001035334.1  sulfotransferase 4A1

      See identical proteins and their annotated locations for NP_001035334.1

      Status: PROVISIONAL

      Source sequence(s)
      BC115282
      UniProtKB/TrEMBL
      Q1RLU6
      Related
      ENSDARP00000132405.1, ENSDART00000158671.2
      Conserved Domains (1) summary
      pfam00685
      Location:47 → 277
      Sulfotransfer_1; Sulfotransferase domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007115.7 Reference GRCz11 Primary Assembly

      Range
      8797139..8810740
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068219736.1 → XP_068075837.1  sulfotransferase 4A1 isoform X1

    RNA

    1. XR_002458108.2 RNA Sequence

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