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    si:ch211-214j24.15 si:ch211-214j24.15 [ Danio rerio (zebrafish) ]

    Gene ID: 558954, updated on 9-Dec-2024

    Summary

    Official Symbol
    si:ch211-214j24.15provided by ZNC
    Official Full Name
    si:ch211-214j24.15provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-110914-85
    See related
    Ensembl:ENSDARG00000063481 AllianceGenome:ZFIN:ZDB-GENE-110914-85
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to enable GTP binding activity. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See si:ch211-214j24.15 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (5304208..5317013, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (5298545..5302895, complement)

    Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene synaptosome associated protein 91b Neighboring gene uncharacterized LOC137491504 Neighboring gene clathrin coat assembly protein AP180 Neighboring gene clathrin coat assembly protein AP180-like Neighboring gene si:ch211-214j24.10 Neighboring gene O-sialoglycoprotein endopeptidase

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    GTPase IMAP family member 8; uncharacterized protein LOC558954

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007115.7 Reference GRCz11 Primary Assembly

      Range
      5304208..5317013 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017355452.3XP_017210941.2  GTPase IMAP family member 8

      UniProtKB/TrEMBL
      A0A8M6Z6A0, H0WEU1
      Related
      ENSDARP00000125370.1, ENSDART00000150867.2
      Conserved Domains (2) summary
      cd01852
      Location:244439
      AIG1; AvrRpt2-Induced Gene 1 (AIG1)
      cl21455
      Location:15209
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases